Gene Cphy_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3478 
Symbol 
ID5743590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4287167 
End bp4288036 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content33% 
IMG OID641294590 
Productribonuclease BN 
Protein accessionYP_001560568 
Protein GI160881600 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000152191 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTTA TTTCAATCGC AAGAGTCATT CGGGTATTTA GTCATAAACT AAGAGATGAT 
TATATCAGTG CCTTTTCTGC GCAGGCAGCA TTCTTTATCT TCATCTCCTT TTTCCCGTTT
GCTATGTTTT TATTATCCAT TATGCAATTC CTACCTTTTA CAGAGAATGA GGTAATGAAT
GCTTGTAGAA GTGTTTTTCC TGCTGCAATT CAAGGCTTTG TAATCTCTAT TATTACTGAG
CTTTATGGAA AAGCTACCTC AACTGCAATA TTATCTGTTA CTTTGGTAGC AACACTTTGG
TCCTCTTCCA AAGGTTTTTT AAGTATTATC CGCGGAATGA ATGGGGTTTA TGCCAATACT
GAAACAAGAA ATTATATTGT TATCCGTATT AAATCAGCGA TTTATACACT TCTTTTTGCC
TTTATGATTA TTTTATTTCT TGTAATCTTT GTTTTTGGAA ATCAGCTATA TCTTTGGATT
GTTAAGCGTT TTCCAGTATT AAAAGAATTC GCTTTAGTTA TTATTAGTGT ACGTACCATC
GTAGGTCTTT GTTTACTGAT TGTTTTCTTT TTATTTATGT TTATGGTGAT ACCTAACCGA
AAAACAAAAT TAATTAAGGA GCTTCCTGGT GCTATATTAG CGTCCTGCGG GTGGATGATT
TTTTCTTATT TGTATTCTTT CTATATTGAT AATATGAGTA ATTACTCTTA TACTTATGGC
AGTCTTACTG CAATTGTTTT AGCCATGATA TGGCTGTATA CCTGTATGTA CATGATGTTT
ATTGGTGCGG AAGTTAACTC AGTACTTTCA AATCCAACGG TACTTGCTGC ACTTAAAAAA
CTGTTTAGCA AAAATTCGGT AGAGGAGTAA
 
Protein sequence
MLFISIARVI RVFSHKLRDD YISAFSAQAA FFIFISFFPF AMFLLSIMQF LPFTENEVMN 
ACRSVFPAAI QGFVISIITE LYGKATSTAI LSVTLVATLW SSSKGFLSII RGMNGVYANT
ETRNYIVIRI KSAIYTLLFA FMIILFLVIF VFGNQLYLWI VKRFPVLKEF ALVIISVRTI
VGLCLLIVFF LFMFMVIPNR KTKLIKELPG AILASCGWMI FSYLYSFYID NMSNYSYTYG
SLTAIVLAMI WLYTCMYMMF IGAEVNSVLS NPTVLAALKK LFSKNSVEE