| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3465 |
|---|
| Symbol | |
|---|
| ID | 5743577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4264057 |
|---|
| End bp | 4265307 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641294577 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001560555 |
|---|
| Protein GI | 160881587 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00393007 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT GGTATAAAAA AATCGTACTA TCTGTTTTAT ATTTAAGTCT TGGAATATTG
TTAATGAATA TTCCAAGTAT AGATAGTCTT GCTGCGAGTG CAACTATTAA AATAGAGGTA
CCAAATGATG AGGTTGGTAA GGGGGATGAA TTTAAGATTT CAATTGTAAT CGCATCCGAT
AGTATACTTG GTGACTTTGA AGGTTACCTT TCCTATAATG CGGAAATCAT AGAATTTATG
TCAGGACCAT CCTGTGTTTC TGGTGGGAAT GGAATGCTTC GATTTATGGA TACGAATGCA
TCTTCCTCCG ATGGTGAAAG AAGATATGTA TTGCGTTTTA AAGCTTTAGA AGTGGGGAAT
TGCCAGCTAT TAATGACTGG AAACCCAATT GCTTATGAGT TCGAATCAGG AGATCCGATG
TCTGTGTCCG CATATTCTGG GAGCGTCACA ATCCGCGCCA AGGAGGCTGC TTCAAAGAAT
ACGAATTTAG CAATATTGAA AGTTAGTCCT GGTACTTTAA CGCCATCCTT TAAGGCCGAC
GAAAAAGAGT ATAGTATTAT GGTTGGACCG GAAACAGAGA AAATTATAAT CAGTGCAATA
CCGGAGGATA CCGATGCAAC AGTGGGGATA AAAGGTAATG AGGCCCTGAA GATTGGAAAT
AATACAATTG TGATAACTGT TACAGCGCAA AGCGGAAATA CTGGTGAGTA CCGAATACAA
GTATTAAAAG AAGAAGGTTA TCAACAAGTG GAAGATGGTT CAAACGAAGG CGGAGATGCT
CCTAATTTTA GAGCAGTGAG AGATGCAGGG AAGATAATGA TAACCGGTCA ATTTAAGTTT
ACCGTAGCAT CTGATGATAG CAATATTATA ATACCAAAAG GTTATGTAAA GAGTAGCATT
CTTGTGGATG GCTGTGCAAT TCCAATTTAT CAAAAGAAAG ACAGTCTAAA AGAGGATTAT
TTACTGATGG TTCTTGAGAA TCAATTCGGG AATACTTCAC TTTATCGATA TGATCGTACC
GAGAAAACGA TTCAACTTTA TACAGAGCAG ACAATAATAG AAAGAGAGGA CAGCTCTCCT
GCTGCTAACA ATAATCTAGA GCTAAAAGTA CAGAAAAAAG AATTTGAAGA GAAAATAAGT
CAATTAACGA TCGTTATTAT TGTACTGTGT GGCATCTGCG CTATACTTTT GATCGGTATT
GTTCGCTTAA TGCTCCGAAT GAAAACGAAT CAAGAGGATG ATTTATTTTA A
|
|---|
| Protein sequence | MKTWYKKIVL SVLYLSLGIL LMNIPSIDSL AASATIKIEV PNDEVGKGDE FKISIVIASD
SILGDFEGYL SYNAEIIEFM SGPSCVSGGN GMLRFMDTNA SSSDGERRYV LRFKALEVGN
CQLLMTGNPI AYEFESGDPM SVSAYSGSVT IRAKEAASKN TNLAILKVSP GTLTPSFKAD
EKEYSIMVGP ETEKIIISAI PEDTDATVGI KGNEALKIGN NTIVITVTAQ SGNTGEYRIQ
VLKEEGYQQV EDGSNEGGDA PNFRAVRDAG KIMITGQFKF TVASDDSNII IPKGYVKSSI
LVDGCAIPIY QKKDSLKEDY LLMVLENQFG NTSLYRYDRT EKTIQLYTEQ TIIEREDSSP
AANNNLELKV QKKEFEEKIS QLTIVIIVLC GICAILLIGI VRLMLRMKTN QEDDLF
|
|---|
| |