| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3459 |
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| Symbol | |
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| ID | 5743571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4257281 |
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| End bp | 4258639 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641294571 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001560549 |
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| Protein GI | 160881581 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.261832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AAAGTACCGT ATTCTTTTGT AAAGAGTGTG GGTTTGAATC TACAAAATGG
GTAGGACAAT GTCCAGGATG TAAATCATGG AACAGCTTTA CGGAAGAACC TGTTGTCAAA
AAGACACCGG TGAATAAAGC TAGTAGCAGA AAAACAGAAA CACCAAAATA CCTCTCTGAG
GTATGTACGG AAGAAGAAAA TCGAACCGTA ACAGGAATTG GCGAATTAGA CCGTGTTCTT
GGTGGCGGTA TCGTAAAAGG ATCTTTAGTT TTAGTCGGTG GAGATCCGGG TATTGGAAAA
TCCACACTTC TTCTTCAGAT GTGCAGACAA TTGACTACGG CTAAAAAGAA GGTACTATAT
GTTTCCGGAG AGGAATCTCA ACAACAAATT AAAATGAGAG CAGAGCGCCT TGGAACCTTC
CAAGGCGAAC TGCTATTACT TTCTGAAACA AACCTTGATC AGATTGAGGA TATTGTATCA
AAAGATACTC CTGAGATAAT GATAATTGAC TCGATCCAAA CAATGTTTAA AGAAGAAATC
AGTGCATCCC CAGGAAGTGT AAGCCAAGTA CGAGAATCCA CAGGAGCCTT AATGCATTTA
GCAAAAGGTA TGGGGATATC GATATTTATT GTTGGGCATG TGACGAAGGA AGGCGTTGTT
GCTGGACCAC GAGTCTTAGA GCATATGGTA GATACGGTAC TATATTTTGA AGGGGATAAT
ACTGCTGCTT ATCGAATCCT TAGAGCGGTG AAAAACCGTT TTGGTTCCAC GAATGAAATC
GGTGTGTTTG AAATGAAAAA TTCAGGATTG GCAGAAGTAA TGAATCCTTC CGAGTATATG
CTTCAAGGAA AACCAGAGGA TGAACCAGGG TCTGTTGTGG CAGCTTCTAT GGAAGGGACA
AGAACCATGT TAGTTGAAGT ACAAGCTTTG GTTTGTCAAT CCAACTTAAA TATGCCCCGT
AGAACAGCAG CAGGAACCGA TTATAATCGT GTGAATTTAT TGATGGCGGT TATTGAAAAA
CGATTAGGGA TACAGTTATC TTTTTGTGAT GCTTATGTAA ATGTTGCAGG TGGAATGAAA
ATAAATGAGC CTGCCCTAGA TTTAGCTATC GTGATGGCGC TAATATCCAG CTACAAGAAT
AGAGCACTAA GTAGTAAAAC ACTTGTGTTT GGAGAAGTAG GTCTTACGGG AGAAGTACGT
GCTGTAAGTA TGGCGGAACA GCGTGTTAAC GATGCAAAGA AGATGGGCTA TGAAATTTGT
ATTTTACCAC AGGTGAATCA GCAGCATTTA AAGATACAGG GAATCCGTCT TATTGGTGTT
AATAACGTCA GAGAATTATT TAAATTATTA CAGGATTAA
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| Protein sequence | MAKKSTVFFC KECGFESTKW VGQCPGCKSW NSFTEEPVVK KTPVNKASSR KTETPKYLSE
VCTEEENRTV TGIGELDRVL GGGIVKGSLV LVGGDPGIGK STLLLQMCRQ LTTAKKKVLY
VSGEESQQQI KMRAERLGTF QGELLLLSET NLDQIEDIVS KDTPEIMIID SIQTMFKEEI
SASPGSVSQV RESTGALMHL AKGMGISIFI VGHVTKEGVV AGPRVLEHMV DTVLYFEGDN
TAAYRILRAV KNRFGSTNEI GVFEMKNSGL AEVMNPSEYM LQGKPEDEPG SVVAASMEGT
RTMLVEVQAL VCQSNLNMPR RTAAGTDYNR VNLLMAVIEK RLGIQLSFCD AYVNVAGGMK
INEPALDLAI VMALISSYKN RALSSKTLVF GEVGLTGEVR AVSMAEQRVN DAKKMGYEIC
ILPQVNQQHL KIQGIRLIGV NNVRELFKLL QD
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