| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3452 |
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| Symbol | |
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| ID | 5743564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4247037 |
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| End bp | 4248374 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641294565 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001560544 |
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| Protein GI | 160881576 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000316888 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA CGGATTGTCT TAAGAACTTT GTAAAATACT CATCGTTAAA CGTCCTAGGT
ATGCTAGGGC TGTCCTGTTA TATTTTAGCG GACACTTTCT TTGTTTCCAA AGGGCTTGGG
GCGAATGGAC TGGCCGCACT CAATCTTGCA ATTCCTATTT ATAGTTTCAT TCATGGAAGT
GGTTTAATGC TTGGCATGGG AGGTGCTACG GGGTATTCTA TCAAAAGTAG CCAAAATGAA
ACAGATAGCG CAAATCACAT ATTTACTAAT ACTGTTTTTC TTGCGCTGGG TTTTGCTGTT
ATTTTCTTTA TACTTGGTCT TTTTTACTCC GAACGCATTG TAATGCTATT GGGTGGGGAG
GGAGAAGTTT TACATATGAG TAAAACCTAT TTACAAGTAA TATTATTGTT CGCTCCGATG
TTTCTATTGA ATAATGTTCT TTTATGCTTT GTGCGAAATG ATGGCTCTCC GCAACTCTCC
ATGATAGCAA TGTTAGGCGG GAGCTTCTCA AATATTGTAC TTGATTATGT CTTTATGTTT
CCACTCGAGA TGGGCATTTT TGGTGCTGTT CTTGCTACTG GCCTTGCACC GGTAATTAGT
ATACTAATTC TCTCTCCATT CTTTTTTCGA AAGAAGAATT GTTTTCACTT AACGAAGTGT
AACCTCTCTA TGACGCTTAT TAGCGGCATT GTTTCAAGTG GAATTCCATC GCTTATTACA
GAGGTATCTT CCGGTATTGT TATGATCGTT TTTAATATAA TTATACTGAG ATTGCAAGGA
AATGTAGGAA TTGCTGCCTA TGGCATTATT GCTAATCTTT CACTGGTAGT AGTTTCGATA
TATACAGGAA TCGCTCAAGG AATACAGCCG TTAATAAGTA GTAACTATGG CTCTGGCAAG
CGTGAAAATG TACAGGCAAT TTTACGATAT GCTATGATTT CTATGTTAGT TGTTTCAGGA
ATTGTTTATC TAACTATAGC TCTAAGAGCA CCGCAGATTG CAAGTATTTT TAATAGCGAG
AAGAATGAGA TTTTGCAAAG CATTGCTGTA AAAGGTTTGA AAATTTACTT CACAGCATGT
GTTTTTGCTG GTTTTAATAT CATTATTTCT GTTTATTTTA CATCGACCGA TTATGCACGC
CCAGCACATA TCATATCAAT TTTGCGCGGA TTTTTAATTA TCATTCCACT TGCATTTTTG
CTATCTGCAC TTGGTGGAAT GTTGGGTGTT TGGCTCGTGT TCCCAGCAGC TGAATTGATT
GTAGCGAACA TAGGAATTAT GTTGTATCTC GTTTCCAGAA AGAAAGCAAT CCTAAAATAT
GAAAACCGAT TGAGATAA
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| Protein sequence | MENTDCLKNF VKYSSLNVLG MLGLSCYILA DTFFVSKGLG ANGLAALNLA IPIYSFIHGS
GLMLGMGGAT GYSIKSSQNE TDSANHIFTN TVFLALGFAV IFFILGLFYS ERIVMLLGGE
GEVLHMSKTY LQVILLFAPM FLLNNVLLCF VRNDGSPQLS MIAMLGGSFS NIVLDYVFMF
PLEMGIFGAV LATGLAPVIS ILILSPFFFR KKNCFHLTKC NLSMTLISGI VSSGIPSLIT
EVSSGIVMIV FNIIILRLQG NVGIAAYGII ANLSLVVVSI YTGIAQGIQP LISSNYGSGK
RENVQAILRY AMISMLVVSG IVYLTIALRA PQIASIFNSE KNEILQSIAV KGLKIYFTAC
VFAGFNIIIS VYFTSTDYAR PAHIISILRG FLIIIPLAFL LSALGGMLGV WLVFPAAELI
VANIGIMLYL VSRKKAILKY ENRLR
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