Gene Cphy_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3439 
Symbol 
ID5743551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4230985 
End bp4231854 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content39% 
IMG OID641294552 
Productmethionine aminopeptidase, type I 
Protein accessionYP_001560531 
Protein GI160881563 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0407215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAG GCAGGAACGA TATGTGCTGG TGTAATAGCG GCAAAAAGTA TAAAAGCTGT 
CATATGGAAA TGGATGAACG AATCGCAGAA TATGCTAGAA GAGGAGCGAT GGTTCCATCC
AGAGATATGA TTAAGACTCC AGAACAAATA GAGGGCATGA AAAAGGCAGG GCATATTAAT
TCTCTTGTAC TTGATTATGT AGAACCTTTT GTTAAAGCAG GGGTGTCTAC GGAGGAACTA
AATAGGCTAG TAGAAGAAGA GACTAGAAGA CTAGGTGGAA TTCCAGCGTG CTTAAATTAT
CATGGTTATC CAAAAAGTGT ATGTACTTCA ATTAATGAAG TAGTTTGCCA TGGTATTCCA
GATCCAAATA GAATCCTTAT GGATGGAGAT ATTATCAATG TGGATTGTAC TACAATTGTA
GATGGATTCT ATGGTGACGC TTCTCGTATG TACTGTATTG GTGATGTTGG AGAAGAGAAA
GAGAGACTTG TTAAGATTAC AAAAGAATGT TTGGAACTAG GTCTTTCCGA AGCAAAACCA
TGGGGATTTC TTGGAGATAT TGGGTATGTA ATCCATCAAC ATGCAAAAAA GAACGGTTAT
ACAGTAGTTA GAAATATTGG TGGTCATGGT ATTGGAACAG AATTCCATGA AGAACCTTGG
GTATGTCATA TTGGAAGAAG AAATACGGAT ATGTTGCTAG TTCCAGGAAT GACCTTTACG
ATTGAACCTA TGATAAATAT GGGGAAGGAA GGGGTAACAG AAGATCAGTT CGATGGCTGG
ACCATTCGTA CGGAAGACGG GAAACCTTCT GCTCAGTGGG AGTACACCAT CTTAATTACA
GAACAGGGAG CAGAGGTTTT ATCCAGATAG
 
Protein sequence
MRIGRNDMCW CNSGKKYKSC HMEMDERIAE YARRGAMVPS RDMIKTPEQI EGMKKAGHIN 
SLVLDYVEPF VKAGVSTEEL NRLVEEETRR LGGIPACLNY HGYPKSVCTS INEVVCHGIP
DPNRILMDGD IINVDCTTIV DGFYGDASRM YCIGDVGEEK ERLVKITKEC LELGLSEAKP
WGFLGDIGYV IHQHAKKNGY TVVRNIGGHG IGTEFHEEPW VCHIGRRNTD MLLVPGMTFT
IEPMINMGKE GVTEDQFDGW TIRTEDGKPS AQWEYTILIT EQGAEVLSR