| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3428 |
|---|
| Symbol | |
|---|
| ID | 5743540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4214880 |
|---|
| End bp | 4216421 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641294541 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001560520 |
|---|
| Protein GI | 160881552 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGA AAAAATTAGA GTTAATTAGT AATGAAGTGG AAGAAACACC AGAAAATGTC
CAGGATAAAA TAAAAAAAAA GAGTAGATTA TATAATCGTC TATTTTTTAA AGTATACTTA
AATTATGCGC TTATGGTCTT GCTTTTTGCT ATCGTGCTTG GAAGTGTTTT TCTTCAGCTA
AGTGAAAAAG CAACAAAAAA TAATTTAAGG CAGCAATTAT TTAGTCAGGC AAAGGTTATT
GCAAAGAGGT ATAATGAGTT TGTAATTAAC GAAGAAAAAA ATAGTTTGGA TTATCTAGAG
TTACTTCGTG AAGTCGGAGT TATTGCGGAG GATATCTGGG TTTTATCGAA TCCTAACGCC
AGTGCGCCTA TGAATAGTGA GATTACCACA ATGCCATTAC AAGCTGTATC AAGGGAATAC
CAAGAAGTTT ACCTTGGAGC ATTTGCAGGA GAAGATACCT ACCGATCCAG TTATAGTAAG
ACTTATGGGT TTGATACCAT TTCTGTTGGA GTCCCAGTAA GAGGTGTTAA TGGTGAAGTA
TGTGGTGCTA TCTTATTAAA TACAAAAGTG GAACGCCAAA CAGAATCTAT CCGAGATACC
AAATCGATGA TTTTCCTAAG TGCGATAGTT TCGTTAATTG TATCTTTTAT TGTTGCAATT
CTTTTTGCAA GACAGCTTGT AAGACCAATC TCAAAAATGC GTCAAACAGC GTTATTACTA
GCTGAAAAAA AATATGAATC AAAAACGGGT ATAGATAGAA AAGATGAAAT TGGTGATTTG
GCTAGAACCA TCGATTTCTT GACGGATAAA TTAATGGAGA ATGAGGTCGT ACGAAAGAAT
CTAGATCAAA TGCGTATGGA CTTCTTTGCA AATGTTTCGC ATGAGCTTAG AACACCAATT
ACAGTGGTTC GTGCATATAC AGAGAGCTTA GTTGATGGTG TAATTGAGGA GGAATCCACA
AAGCAGCAAT GTTATGAAAA GATGTTATTA GAATGCAAAA GTATGGAGCG TTTAGTTGGA
GATCTTTTAA TACTAGCGAA GATGCAAAAT CCTGATTTTG TAATTGAAAA AGAGCCTGTT
AATTTAACTC AAGTTTTTGA GGATATCCTT AAGACTGTTA GAACCATGGG CACTGATAAG
CATATCAGCG TATGCCTTGA TAATGATCAT AACGTGCAAT TGATGTATGG TGATTATGAC
CGTTTACGCC AGATGTTTTT AGTGATCTGT GATAATGCAA TTAAATTTTC AAAGGAAGAT
TCGACCATAT ATATTTCAAT TACCAGAGGA GAAAAACTTC GTATTTCGAT ACGAGATGAA
GGAACCGGTA TTGAAAAAGA GGAGTTGTCT AGCATATTTG ATAAATTTTA TAAATCAAAG
TTACGTCAAA ATGCGAAAGG TTCCGGTCTT GGGCTTGCTA TCGCACGTCA AATTGCTTTG
AAACATGGAG GAACAATCGA AGTATTCAGT ACCATTTCGG TTGGAACAGA GTTTGTATTC
TCATTTGACT ATATCACGGA AGAAGAATTG GAACAAAGGT GA
|
|---|
| Protein sequence | MNEKKLELIS NEVEETPENV QDKIKKKSRL YNRLFFKVYL NYALMVLLFA IVLGSVFLQL
SEKATKNNLR QQLFSQAKVI AKRYNEFVIN EEKNSLDYLE LLREVGVIAE DIWVLSNPNA
SAPMNSEITT MPLQAVSREY QEVYLGAFAG EDTYRSSYSK TYGFDTISVG VPVRGVNGEV
CGAILLNTKV ERQTESIRDT KSMIFLSAIV SLIVSFIVAI LFARQLVRPI SKMRQTALLL
AEKKYESKTG IDRKDEIGDL ARTIDFLTDK LMENEVVRKN LDQMRMDFFA NVSHELRTPI
TVVRAYTESL VDGVIEEEST KQQCYEKMLL ECKSMERLVG DLLILAKMQN PDFVIEKEPV
NLTQVFEDIL KTVRTMGTDK HISVCLDNDH NVQLMYGDYD RLRQMFLVIC DNAIKFSKED
STIYISITRG EKLRISIRDE GTGIEKEELS SIFDKFYKSK LRQNAKGSGL GLAIARQIAL
KHGGTIEVFS TISVGTEFVF SFDYITEEEL EQR
|
|---|
| |