| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3416 |
|---|
| Symbol | |
|---|
| ID | 5743699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 4194514 |
|---|
| End bp | 4195974 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641294528 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_001560508 |
|---|
| Protein GI | 160881540 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT TCAAAAATCT ATCCCGAAAA AAGAAAATAC GATATGGTAT TTTGTCCGTC
CTAATATTCT ATCTAGTTTA TGTTATCATC AGTGTTACCA TCCCCTTCGC AAATCCACCA
AAAGTTAGTG AAGAATTTAA GCAAAGTGTT AATTTAAACG CTTTTTATAG TGATACCATA
TCGGTAGATC GTGCTGCTAT AGTGGAAACT AGTCAAGATG CGCTTGATGT TCGAATACAT
ATGATTAATC AAGCCAAAGA AAAGATTGCA ATTTCTTCTT TTTCCATAAA GCATGACCGC
AGCTGTAAGG AAATTGCTAG TGCAGTCTTA GCTGCTGCTA ATCGTGGTGT TAAAGTTCAA
ATTCTTGTAG ATGGACTTAC AGGTAATATC GATATGGGAT CTGATCCAAT TTATTATGCT
CTTGGAACGC AGGAAAATGT TGAAATTCGC TATTATAATA TTCTTAACTT ATTAAAACCA
TGGACAGCAA ATGGCAGACT ACATGATAAA TACCTTATTG TAGATGATTC TTTATTGCTC
CTCGGGGGCA GAAATATCTC AAATTATTTT CTTGGTGAGT ATAATACCAA TGTCTTAAGC
TATGATAGAG ATATCCTCGT ATATAATACT GCGGCTAAAA CAAGTAGAAA TGATGAAAGT
GTTCTATCCC AAGTATGGAG TTATTTCGAA ACAATTTGGA ATGATAAGAT GAGTGAACCG
GTATTTGACC GGGTTCCAAG GTATAAGAAC AATAAGGTTT CAAAGGCTTA TGAAACTCTA
GGTTCCATCT ATCAGGACTT AAAAACATCC AGACCTCAGC TTTTTACCGA AGTTGATTAT
GTTCCATTAA CTGTTCCAAC AAATAAAGTT AGTTTAATTA CAAATCCTAT TCATATCATG
GCAAAAGAAC CTCATATCTG GTATCAGATG GCGGAGCTAA TGAAAAATGC AGAGAAACGT
GTTTATATTC AGTCTCCATA TGCTGTCCTA GACTCAACTA TGTATCAGGA TATGAATGAA
ATCAGCAACA AGGTACCTGA TTTTCGAATG CTCATTAACT CTACCGCTGG CGGCGATAAT
GTCATGGCAT CTTCAGATTA CACCTTCAAT AAACGAAAAG TTATCAAAAC AGGCGTGCAG
ATTTTTGAAT TTCAAGGAGA ACACTCCATG CACGATAAAT CTATTTTAAT TGACGATGAC
ATATCTATTA TAGGTTCCTT TAATGTTGAT ATGCGAAGTG CTTATCTGGA TACCGAAGTA
ATGCTTGTCG TACATGGTAC TGAGTTTAAC AAACAATTAG AATCCTATAT GTATGCGATG
CAAGATAAGT CTCTTCCTGT ACATGAAGAT GCATCCTATG GAACCAACGG AAATGTCATT
CCACTAAAAA TTTCAACCGG TAAGAAGATG CTTTATAACA TTACCTCTGC TGTATTTCAG
TTATTTCGCT ATTTATTATA G
|
|---|
| Protein sequence | MQKFKNLSRK KKIRYGILSV LIFYLVYVII SVTIPFANPP KVSEEFKQSV NLNAFYSDTI
SVDRAAIVET SQDALDVRIH MINQAKEKIA ISSFSIKHDR SCKEIASAVL AAANRGVKVQ
ILVDGLTGNI DMGSDPIYYA LGTQENVEIR YYNILNLLKP WTANGRLHDK YLIVDDSLLL
LGGRNISNYF LGEYNTNVLS YDRDILVYNT AAKTSRNDES VLSQVWSYFE TIWNDKMSEP
VFDRVPRYKN NKVSKAYETL GSIYQDLKTS RPQLFTEVDY VPLTVPTNKV SLITNPIHIM
AKEPHIWYQM AELMKNAEKR VYIQSPYAVL DSTMYQDMNE ISNKVPDFRM LINSTAGGDN
VMASSDYTFN KRKVIKTGVQ IFEFQGEHSM HDKSILIDDD ISIIGSFNVD MRSAYLDTEV
MLVVHGTEFN KQLESYMYAM QDKSLPVHED ASYGTNGNVI PLKISTGKKM LYNITSAVFQ
LFRYLL
|
|---|
| |