Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3406 |
Symbol | |
ID | 5743683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4168817 |
End bp | 4170628 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641294512 |
Product | histidine kinase internal region |
Protein accession | YP_001560498 |
Protein GI | 160881530 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.264135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGAG CCCATGAGTG GATGAAGCAT CTTAGTTTAA AGAAAAAGAT AATTCTATAC AGCTATTTTG TAGTAACGCC TGTTCTTTTG ATTATTAGTA TAATATTGTT CTTAAATAAT TATAAGAAAA TGATACAAAA ACAACATGAA GAAAACTTAA ACAGCGTCAG AAGCTTAGTA AATAGTTTGG ACGTTATTGA AACAGAGGTA ACGGATTTGT CTTTGTATAT CTGCATTAAT AATGATATTA CTAAGATATT GAAATCAGAG AATCCCTCAG AGCTGAATAA AGATTCTAGA CTGTGGTTAA ATCGTGCTCC AATGAAAATT ATACAGGACA TGATTGCATT AAAGGGCTAT ATTAAAACAA TCGCAATCTA TCCGGAAAAT GGTGTCAGAC CTTATTTAAG ATGTATTGAC GCTACCTCTT ATCTGCCTAG CATAGAAGAA GTTAGAAATA TCGAAATCTA TCAAAAGTCA TTGAAAGGTA AAGGCACTGT ATACTGGCAG AGGGTTTCAA GAACAGATAA AAGTACATAT CAGGCAAATC GTACCGACAA AATTGTAATG TATCGAGGAA TGTATGATTT GGCGAAAAAG ACTCCGCTTG GGTATCTGGT TATAGGTATT GCTGCTGAAA AATATACCGA TCTTTGTGTA AATGCTATCC AGCAGCAGAA TGAAGGTATC GTTGTATTTA GCGCTGAAGG TATAGAGCTG ACGAGGTACG GAAAAGTAGA TGGAGAAATA GTTAGATACA TTCAAGGTGA GAACTACATA CAAAAAGATC ATCGACAGAG AGAGAGTCAG TTAACTCTTG GTGACTATAA TGTTTTTTGC AGTCAGAACA AGGAAAATGG AGTATTGGTA TGCAAGATGG TACCAAAGAG TAATGAAAAG GGACCTATGT ATACCATTAC ATCAGCTCCT ATTACCTTAT TAATTGCTGT ATTGATTGGG TTATTCCCTG TACTAATGTT TATATCTGCA ATTGTATCAA AGCCTCTTGG CAGATTGTGC AGAGCGATGG AGCAGTTTAA GTTAGGAGAT TTCAATCAGC AGGTGGAGGT AACCGCGTAT GATGAAGTGG GAGAAGTAAC AGAATGTTTT AATCAGATGG TTGTAGAAAT CAAAGAACTG ATTAATAATA ACTATGTTAT GGCACTGGCG GAGAAAGAAA GTGAACTTCG AGCACTACAG GCACAGATTA ATCCTCATTT TTTATATAAT ACACTGGATT CCCTATATTG GCGCGCATTA GATGCAGGAA ATGAAGAAAT TTCAGAGGAT ATCCTTGCAT TATCACAGTT ATTCCGTATG GTTCTTTCAG AAGGAAAGGG CGTAACAACG GTGGCACAGG AGAAAGAGCT TTTAACGAGA TATTTACATA TTCAGAAAAT GAGATTTTCT AAAAGATTAG ACTATAAAAT AGCGATAGAG GAAGAGGTAT TGGAGGCTGT AATTCCTAAA CTTATTTTGC AGCCATTTGT TGAAAATGCT ATCGTACATG GATTCGAAAA TGTTGGTACC GAATGCCTTT TATTAGTTAC GGGAAGTCTT TCGGATAATC AAATCTTATT TTGCATTGAA GACAATGGCG CAGGGATGAC AAAAGAACAA ATCGAGGCAA TCTGGAATGT AGAAGACTTT AAACGCTATG CAAATCAAAG GGTTGGCCGG TATGCAATCA AGAATGTAAA AGAGAGATTA GAGCTAAAGT ATCAAGACAA TTTTATGCTT ACCATTGAGA GTGAGAGAGG AAAAGGAACC ACTGTAACTA TTCGTATTCC ATTTGAAAAG AAGGAGATTT AA
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Protein sequence | MRRAHEWMKH LSLKKKIILY SYFVVTPVLL IISIILFLNN YKKMIQKQHE ENLNSVRSLV NSLDVIETEV TDLSLYICIN NDITKILKSE NPSELNKDSR LWLNRAPMKI IQDMIALKGY IKTIAIYPEN GVRPYLRCID ATSYLPSIEE VRNIEIYQKS LKGKGTVYWQ RVSRTDKSTY QANRTDKIVM YRGMYDLAKK TPLGYLVIGI AAEKYTDLCV NAIQQQNEGI VVFSAEGIEL TRYGKVDGEI VRYIQGENYI QKDHRQRESQ LTLGDYNVFC SQNKENGVLV CKMVPKSNEK GPMYTITSAP ITLLIAVLIG LFPVLMFISA IVSKPLGRLC RAMEQFKLGD FNQQVEVTAY DEVGEVTECF NQMVVEIKEL INNNYVMALA EKESELRALQ AQINPHFLYN TLDSLYWRAL DAGNEEISED ILALSQLFRM VLSEGKGVTT VAQEKELLTR YLHIQKMRFS KRLDYKIAIE EEVLEAVIPK LILQPFVENA IVHGFENVGT ECLLLVTGSL SDNQILFCIE DNGAGMTKEQ IEAIWNVEDF KRYANQRVGR YAIKNVKERL ELKYQDNFML TIESERGKGT TVTIRIPFEK KEI
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