Gene Cphy_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3395 
Symbol 
ID5743672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp4154158 
End bp4154739 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content32% 
IMG OID641294501 
ProductTetR family transcriptional regulator 
Protein accessionYP_001560487 
Protein GI160881519 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.584176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTC CAAGAAAAGA TAATGTCAAA GAATTAATTA TTAATGCAAC CGAGCAACTG 
TTGGAAACTC AGAAGCTCTC TGAAATAACA TTTGCTCAAA TAGCTTCCTG TGCTGGTATT 
TCTAAAGGAA CACTTTATTA CCATTATAAA AATAAGAATG ATATTTTATT TGATATAACG 
GATAAGTATT TACAACAGCA ATGGGACGAT TTAATTGCAT GGACAGAAAA TCCACAAAAA 
GATACCTCGC TACATCGTCT TGTACAGTAT GTTTTAGAGC GAGATGTTGC GAATGTAGGA 
ATGCGTTTAC ACTTTTTTTA TGATGCTATG CTTGGCAACG AAGAAGTTCG TTCCAAATTG 
ATGCAGCGAT ATAATGATTT TGCAAAATTA ATATCTAAAA AAATCAGTGA TCGAAATGAT 
AAACTTCCCG CAGAATATAT TACCTGGCTT ATTCTACTAA TAAGTGACGG ACTCTTCATT 
CATAAAACTT TGAATAATGA TAATTTAGAT GTTGATCTGT TTATTAAACA GAGTGGGCAA 
TTTATGAAAC AAGTGATATC TTATGTAGAA AATGAAAAAT AA
 
Protein sequence
MAAPRKDNVK ELIINATEQL LETQKLSEIT FAQIASCAGI SKGTLYYHYK NKNDILFDIT 
DKYLQQQWDD LIAWTENPQK DTSLHRLVQY VLERDVANVG MRLHFFYDAM LGNEEVRSKL 
MQRYNDFAKL ISKKISDRND KLPAEYITWL ILLISDGLFI HKTLNNDNLD VDLFIKQSGQ 
FMKQVISYVE NEK