| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3393 |
|---|
| Symbol | |
|---|
| ID | 5743670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4150901 |
|---|
| End bp | 4152223 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641294499 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001560485 |
|---|
| Protein GI | 160881517 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACT ATGATGTAAT TGTAATAGGA GGGGGACCTG CGGGTCTGGC TGCAGCCATA
TCAGCTAAAA GGCAAGGTGC AAAAGTTTTA TTAATTGAAC GTGAAGAACG GCTGGGTGGT
ATCTTAAAAC AGTGTATCCA CGATGGTTTT GGTTTACTTC GATTTGGTGA GAAACTTTCC
GGTCCTGAAT ATGCATGGCG CTATGTCGAT GAGTTTCATC AAAGAAAGAT TGATTTTAAT
GTCCTTACCT ATGTTACAGG AATTGAAAAA CTAGAGCATA ACTATTTGGT ACGTGTAGTA
AATACAAAAG GTGTGCTTGA ATACACTTCA AAATCTATTA TCTTAGCAAC CGGCTGTCGA
GAGAGAACAG CGAAGCAGGT TTTTATTCAT GGAACGAGGC CATCAGGAGT ATTTACTGCA
GGAACAGCAC AAGCATATAC CAATATATTA GGTCAGCTTC CAACAAAAAA ATGTGTTATC
TTAGGAAGTG GCGATATTGG ATTAATTATG GCAAGAAGAC TCACCTTAGA GGGAGCAAAA
GTATGTGGGG TATATGAAGC AAAGGCTACT CCCTCTGGAC TAACACGAAA TATTATGCAG
TGTCTTAATG ACTTTGATAT TCCACTATAT TTATCACACA CGGTAACTAG ACTTTACGGG
GAAGAAAGGT TACAAGCAGT TGAAATCATG AAGGTGGATG AGTCAATGGT GCCAATTCCG
GGGACAGAAG AGATTGTAGA ATGTGATTCT TTAATATTAT CAGTTGGCTT GATTCCTGAA
AATGAGTTGG CAGAAAGTCT GAATGTACGA ATGGATTCAA AGACAAAAGG GCCAATTTGT
GATGATGATT TTATGACAAG TGAACCAGGA ATCTTTATTT GTGGGAATGC ACTTCATGTT
AATGATCTGG TGGATTATGT ATCAGAGAAT GGGGAACTTG CAGGAAAAGC AGCTGCAAAA
TATTGCTATG AGTCAAAAGA GTTAGTATCA TTCAAAGTAG ACAAAGATTT TCTTTACTTT
GTACCACAAC AGATTGGTAT CAGTCAAGAA AGCAAACCTG CTACATTTTA TTTTAGAAGC
AGTCAAGTAT TAAGGAAGGC CGTAGTAACA ATAAAAGTCA ATGGAAAGCA AATATTTGAA
AAGAAATATT CATATTTAAA ACCTCCAGAA ATGGAAACTA TCAAGCTGGA TATGAGTCAA
TTTCATTTAG TTAAAGAAGA TACTCTAACA GTTGAAGTGA AAGGAGAAAA GTGTGAAGAA
AAATCTATTT CACACCCCTT GATTAGTACG CGTGCAGAGC ACGCAGATGG GAGCCAAGTA
TGA
|
|---|
| Protein sequence | MLNYDVIVIG GGPAGLAAAI SAKRQGAKVL LIEREERLGG ILKQCIHDGF GLLRFGEKLS
GPEYAWRYVD EFHQRKIDFN VLTYVTGIEK LEHNYLVRVV NTKGVLEYTS KSIILATGCR
ERTAKQVFIH GTRPSGVFTA GTAQAYTNIL GQLPTKKCVI LGSGDIGLIM ARRLTLEGAK
VCGVYEAKAT PSGLTRNIMQ CLNDFDIPLY LSHTVTRLYG EERLQAVEIM KVDESMVPIP
GTEEIVECDS LILSVGLIPE NELAESLNVR MDSKTKGPIC DDDFMTSEPG IFICGNALHV
NDLVDYVSEN GELAGKAAAK YCYESKELVS FKVDKDFLYF VPQQIGISQE SKPATFYFRS
SQVLRKAVVT IKVNGKQIFE KKYSYLKPPE METIKLDMSQ FHLVKEDTLT VEVKGEKCEE
KSISHPLIST RAEHADGSQV
|
|---|
| |