| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3382 |
|---|
| Symbol | |
|---|
| ID | 5741664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4128852 |
|---|
| End bp | 4130012 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641294485 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001560474 |
|---|
| Protein GI | 160881506 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000752842 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGT ATAATTGTTT AAATCCGATT GCACCAGTTG GACTTAATAT ATTTAATGAT
AATTATGTAA AAACCGATGT ATTTGAGGAA GCAGAAGCAG TATTAGTTCG AAGTGCAGCA
ATGCATGAGA TGGAGTTCTC TTCTAACTTA AAAGCAATAG CCCGTGCAGG TGCAGGTGTT
AATAATATTC CATTAGATAA ATGTGCAGAG CAGGGTATTG TTGTATTTAA TACACCAGGT
GCAAATGCAA ATGGTGTAAA AGAATTAGTT GTAGCTGGAA TGCTATTAGC AGCCCGTGAT
ATCAGTGGTG GTATCAACTG GATACAGACT GTAAAAGACG ATGAAAATGT AGCAAAGCTT
GTAGAAAAAG GGAAAGCAAA ATTCTCTGGA ACTGAAATTC AAGGGAAAAA ACTTGGGGTT
ATCGGTCTTG GAGCAATTGG TGTTCTTGTA GCTAACGCAG CCAATAGACT TGGGATGGAG
GTATTTGGAT GTGATCCATT TATTTCTGTG GAACATGCTT GGAACTTATC TCGTGATATA
AAGTACGTAA AGACGAGAGA AGAAATCTTT AAAGAGTGTG ATTATATTAC GGTTCATGTG
CCATTACTTG ATGACACGAA GAAAATGATT AATAAAGACA CCTTAGCAAT GATGAAAGAT
GGTGTTGTAA TCCTTAACTT TGCTCGTGAC CTTTTGGTGG ATGATGATGC AATAGAAGAG
GCACTTAAGT CTGGTAAGGT AAAGAAGTAT GTTACTGACT TCCCTAATGC TAAGACAGCT
GGAATGGAAG GAGTAATTGC AATTCCTCAT CTTGGTGCTT CTACAGAAGA ATCGGAAGAT
AATTGTGCAG TTATGGCAGT GAAGCAACTT CGTGACTACA TCGAGAACGG TAACATTGTG
AATTCCGTGA ATTATCCAAG TCTTGATGCT GGTGTATGTC AGGCTGGTAC TCGCGTAACG
ATTTGCCATA GAAACAAACC AAACATGCTT GCACAGTTTA CTACTGTATT TTCCTCTAAG
AATCTTAACA TAGAGAATTT GGCAAATAAG AGTAAGGGTG ATTATGCTTA TACTGTACTT
GACTTATGTA CTGTGGTAAC TGAGGAATTT GTAAAAGAAT TAGAAGAAAT CGAAGGTGTA
TTAAAGGTAA GAGTTATATA A
|
|---|
| Protein sequence | MTKYNCLNPI APVGLNIFND NYVKTDVFEE AEAVLVRSAA MHEMEFSSNL KAIARAGAGV
NNIPLDKCAE QGIVVFNTPG ANANGVKELV VAGMLLAARD ISGGINWIQT VKDDENVAKL
VEKGKAKFSG TEIQGKKLGV IGLGAIGVLV ANAANRLGME VFGCDPFISV EHAWNLSRDI
KYVKTREEIF KECDYITVHV PLLDDTKKMI NKDTLAMMKD GVVILNFARD LLVDDDAIEE
ALKSGKVKKY VTDFPNAKTA GMEGVIAIPH LGASTEESED NCAVMAVKQL RDYIENGNIV
NSVNYPSLDA GVCQAGTRVT ICHRNKPNML AQFTTVFSSK NLNIENLANK SKGDYAYTVL
DLCTVVTEEF VKELEEIEGV LKVRVI
|
|---|
| |