Gene Cphy_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3353 
Symbol 
ID5741635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4087902 
End bp4088837 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content37% 
IMG OID641294456 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_001560445 
Protein GI160881477 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.890946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAG AAATAATTCA TACGGTAAAA AGTCCTTATC GTGATGATAT GCATATTGTT 
GGTTTTCGCT TTGGAAAGGG AGAAAAAGCA GCATGTATTG TGGGACCAAC TAGGGGAAAT
GAAATACAAC AGTTATATAT CTGCTCTCAG TTGATTAAGG AATTAACTAG GCTTGAAAAA
ATTGGAGCAA TTGTAAATAA CAATGAAATC CTGGTAATAC CAACATTGAA TCAATCTAGT
ATTAACATAG AGAAACGTTT TTGGGCGATG GATAAGTCTG ATATAAACCG TTTGTTTCCA
GGAGATGATA GTGGTGAGAC AACAGAGCGT ATCGCCGGTG GAGTATTTAA GGCAGTGGAA
GGTTATAATT TTGGTATCCA ATTCGCAAGT TTTCATACTC CAGGAGAATT TATTCCTCAT
GTCAGAATGA TGGAAACAGG GCATGAAAGC ACTAGCCTCG CGAATCTATT TGGGCTACCA
TATGTACTCA CAAAAAAACC ACATCCATTT GATACAGGAA CTTTAAATTA TTGCTGGCAA
GTGAATGGAA CGAATGCATT TTCTGTATAT ACTCCAGCAA CCAGCAGTAT TGATGAAACA
TCAGCAAGAC AGGCGGTATC TTCGGTTCTT AGATTTCTAA CACGTATGGG AATCATCAAG
TACAACTGTC ATAGCGGTTA TATAGCAAGT ATTGTGGAAG AAGAAACTTT AATGCCAATT
AAAACAGATG TTTCAGGAAT ATATCGCCCT CTTAGAAAAC CAGGAGAAGA AGTGAAATTT
GGTGATGTCT TAGCAGAAGT TGTTGACCCG ATCGAAGGGG AAGTAATCTC ACAAATCATA
GCACCAAGCG ATGGTATTAT CTTCTTTGCT CATAGTAAAC CTTTGGTGAT ACAAAATTGT
ATTGTATATA AACTGATACG AAGATTACAC GAATAA
 
Protein sequence
MFQEIIHTVK SPYRDDMHIV GFRFGKGEKA ACIVGPTRGN EIQQLYICSQ LIKELTRLEK 
IGAIVNNNEI LVIPTLNQSS INIEKRFWAM DKSDINRLFP GDDSGETTER IAGGVFKAVE
GYNFGIQFAS FHTPGEFIPH VRMMETGHES TSLANLFGLP YVLTKKPHPF DTGTLNYCWQ
VNGTNAFSVY TPATSSIDET SARQAVSSVL RFLTRMGIIK YNCHSGYIAS IVEEETLMPI
KTDVSGIYRP LRKPGEEVKF GDVLAEVVDP IEGEVISQII APSDGIIFFA HSKPLVIQNC
IVYKLIRRLH E