Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3353 |
Symbol | |
ID | 5741635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4087902 |
End bp | 4088837 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641294456 |
Product | succinylglutamate desuccinylase/aspartoacylase |
Protein accession | YP_001560445 |
Protein GI | 160881477 |
COG category | [R] General function prediction only |
COG ID | [COG3608] Predicted deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.890946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCAAG AAATAATTCA TACGGTAAAA AGTCCTTATC GTGATGATAT GCATATTGTT GGTTTTCGCT TTGGAAAGGG AGAAAAAGCA GCATGTATTG TGGGACCAAC TAGGGGAAAT GAAATACAAC AGTTATATAT CTGCTCTCAG TTGATTAAGG AATTAACTAG GCTTGAAAAA ATTGGAGCAA TTGTAAATAA CAATGAAATC CTGGTAATAC CAACATTGAA TCAATCTAGT ATTAACATAG AGAAACGTTT TTGGGCGATG GATAAGTCTG ATATAAACCG TTTGTTTCCA GGAGATGATA GTGGTGAGAC AACAGAGCGT ATCGCCGGTG GAGTATTTAA GGCAGTGGAA GGTTATAATT TTGGTATCCA ATTCGCAAGT TTTCATACTC CAGGAGAATT TATTCCTCAT GTCAGAATGA TGGAAACAGG GCATGAAAGC ACTAGCCTCG CGAATCTATT TGGGCTACCA TATGTACTCA CAAAAAAACC ACATCCATTT GATACAGGAA CTTTAAATTA TTGCTGGCAA GTGAATGGAA CGAATGCATT TTCTGTATAT ACTCCAGCAA CCAGCAGTAT TGATGAAACA TCAGCAAGAC AGGCGGTATC TTCGGTTCTT AGATTTCTAA CACGTATGGG AATCATCAAG TACAACTGTC ATAGCGGTTA TATAGCAAGT ATTGTGGAAG AAGAAACTTT AATGCCAATT AAAACAGATG TTTCAGGAAT ATATCGCCCT CTTAGAAAAC CAGGAGAAGA AGTGAAATTT GGTGATGTCT TAGCAGAAGT TGTTGACCCG ATCGAAGGGG AAGTAATCTC ACAAATCATA GCACCAAGCG ATGGTATTAT CTTCTTTGCT CATAGTAAAC CTTTGGTGAT ACAAAATTGT ATTGTATATA AACTGATACG AAGATTACAC GAATAA
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Protein sequence | MFQEIIHTVK SPYRDDMHIV GFRFGKGEKA ACIVGPTRGN EIQQLYICSQ LIKELTRLEK IGAIVNNNEI LVIPTLNQSS INIEKRFWAM DKSDINRLFP GDDSGETTER IAGGVFKAVE GYNFGIQFAS FHTPGEFIPH VRMMETGHES TSLANLFGLP YVLTKKPHPF DTGTLNYCWQ VNGTNAFSVY TPATSSIDET SARQAVSSVL RFLTRMGIIK YNCHSGYIAS IVEEETLMPI KTDVSGIYRP LRKPGEEVKF GDVLAEVVDP IEGEVISQII APSDGIIFFA HSKPLVIQNC IVYKLIRRLH E
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