Gene Cphy_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3333 
Symbol 
ID5741613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4058214 
End bp4059266 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content33% 
IMG OID641294434 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001560425 
Protein GI160881457 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAACA TAAGGAAGAA CATAAGGAAG AATAAGAAAC AGAGTATTAA CATAGTATTT 
AAGCTCTTAG TTTCTTATAT AAAAAGACAT ATATCAATTA TTGTGTCCGC AGGGATAACG
ATAGTACTAT TTCTTATCGT ATTCAGTCTA TATAATCTTC CAGTCGAAGC GGTTTTGTAT
GCCACTGCAT TATCCATTGT AGCAGTTAGT TTATTTGGTA TAATACGTTT TTATATCTAT
TATAAGAGGC AGCAAAAACT TCAATGGTTA AAGCAGACAA TCACCCTATC AGAACTAGAA
TTTCCGCAAC CACAGGATAA GATAGAGGAA GATTATCAAG AAATTATCCG CATATTAAGT
GAAAGGTATA CAAAGATGTT ATCTGATGTA GATGTAAAAT TATCAGACAT GATAGACTAT
TATACCATGT GGGTACATCA GATTAAGACA CCAATTGCAG CAATGCGTTT GTTATTACAG
AGTGAAGAAA TGTCAATGTC AGAGGAATTA CAAGATCAAT TATTTAAAAT AGAGCAATAT
GTAGGAATGG TACTCCAATA CCTGCGTGTA GAGAGTATGT CAGGAGATAT GCTATTATCA
CGGTATGACC TTGATGATAT TGTAAAACAA GCTATAAAAA AGCATGCAAA GTCTTTTATC
AGAAAGAAGA TTACATTACA TTATGAAGAA ATTCAAAAAA TTGTATTAAC AGATGAAAAA
TGGCTCGTCT TTGCGATAGA ACAGTTAATA TCAAATGCAT TAAAATACAC GAATTCAGGT
AGTATCTCAA TTTATTTAGA TGCAGAACTT GAAGATACCT TAGTAATAGA AGATACCGGT
ATTGGTATTA GCCCTGAGGA TTTGCCAAGA GTATGTGAGA AAGGTTACAC TGGATATAAT
GGTAGAGCAG ATAAAAAATC TACTGGAATC GGTTTATATC TTTGCAAACG TATCTTAAAT
AAGTTATCGC ACACCCTGAC GATAACCTCC GAAGTTTCGA TAGGAACTAA GGTGTATATA
GGCTTGGCTA CGAAAGAATT AACCGTGGAA TAA
 
Protein sequence
MENIRKNIRK NKKQSINIVF KLLVSYIKRH ISIIVSAGIT IVLFLIVFSL YNLPVEAVLY 
ATALSIVAVS LFGIIRFYIY YKRQQKLQWL KQTITLSELE FPQPQDKIEE DYQEIIRILS
ERYTKMLSDV DVKLSDMIDY YTMWVHQIKT PIAAMRLLLQ SEEMSMSEEL QDQLFKIEQY
VGMVLQYLRV ESMSGDMLLS RYDLDDIVKQ AIKKHAKSFI RKKITLHYEE IQKIVLTDEK
WLVFAIEQLI SNALKYTNSG SISIYLDAEL EDTLVIEDTG IGISPEDLPR VCEKGYTGYN
GRADKKSTGI GLYLCKRILN KLSHTLTITS EVSIGTKVYI GLATKELTVE