Gene Cphy_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3326 
Symbol 
ID5741606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4049150 
End bp4049728 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content38% 
IMG OID641294427 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001560418 
Protein GI160881450 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000509588 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAG GAATGGGTTA TGATGTTCAT AAATTAGTAG AAGGACGCGA TTTAATTATA 
GGAGGCGTTA CGGTACCTTA TGAAAAGGGT TTGTTAGGTC ATTCAGATGC AGACGTTTTA
GTTCATGCCA TTATGGATGC CATCCTTGGT GCTGCAGCGC TTGGAGATAT AGGAAAGCAT
TTTCCAGATA CATCAAAAGA GTATGAAGGT GTTTCAAGTA TAGTTTTATT AGAAAAAGTG
AAAGAATTAG TTGAGAAAGA ATGTTATATC ATTGGGAACA TCGATGCTAC AATCATCGCA
CAGCGACCAA AGATGGCACA GTACATTCCT CAAATGGTTA CTAATATTGC AAAAACTCTT
CATATCTCAG AAAAACAGGT TAATGTCAAG GCAACTACAG AAGAAGGACT TGGCTTTACT
GGTAGCGGGG ATGGAATTTC CGCTCAGGCA ATTTGTTTGT TAAATACAGT TGATAACTAT
GCGTACGATG GTACAGATAG TGTTGCATAT GTTTATGATC CTGAAGCCAC AGAAACAAAA
AACTGTTCTG GTTGTCAGGG ATGTTGCAGG AATAAATGA
 
Protein sequence
MRIGMGYDVH KLVEGRDLII GGVTVPYEKG LLGHSDADVL VHAIMDAILG AAALGDIGKH 
FPDTSKEYEG VSSIVLLEKV KELVEKECYI IGNIDATIIA QRPKMAQYIP QMVTNIAKTL
HISEKQVNVK ATTEEGLGFT GSGDGISAQA ICLLNTVDNY AYDGTDSVAY VYDPEATETK
NCSGCQGCCR NK