| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3319 |
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| Symbol | |
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| ID | 5741598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4041748 |
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| End bp | 4043130 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294420 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001560412 |
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| Protein GI | 160881444 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00330578 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC AAATGAGTGC TGATTTAGGT AATGGAAAGA TCGGTAAGCT TTTATTTCAA
CTATCCGTAC CTGCAATCGC AGCACAGATT ATTAACGTAC TCTACAACAT GGTTGACCGT
GCTTATATCG GTCATATTCC AGACATAGGT ACACAGGCGT TAACTGGAGT TGGAGTAACT
ATGCCAGTAA TCATGGCTAT CAGTGCCTTT GCAGCTTTAG TTGCTATGGG AAGTGCCCCT
AGAGCAGGTA TTATGCTAGG AAAAAAGGAT CCAGAAAGTG CTGAGAAGAT TCTTGGAAAC
TCTTTTTTCT CCTTAATTAC CGTGTCAATT ATACTAACCG CAGTCATTTT AATATTTGGA
GAACCAATTT TAATGATTTT TGGGGCCAGC GAGAATACCA TAGGATACGG ACTTGACTAC
CTTAATATCT ATGCACTCGG TACCATCTTC GTACAAATCA CACTTGGTAT GAACGCATTT
ATCTCGACTC AGGGCTTTGC AAAAACTAGT ATGTATACGG TGGCTATTGG TGCCATTATT
AACATCATCT TAGACCCTAT CCTAATCTTT GGTTTTGATA TGGGGGTAAA GGGTGCTGCA
TTAGCAACAA TACTTTCCCA GGCCGTATCC TGTATCTGGG TAATTCGATT CTTAATATCG
GACAAATCAG TACTTCGGAT TAAAAAAGAA AATGTAAGAT TTACTCCTAA GATTATGCTT
CCATGTATTG CACTTGGACT TTCTCCTTTT ATCATGCAGT TCACAGAGGC CGTAATTATT
GTTTGTTTCA ACTCAAGTTT ATATAAGTAT GGTGGTGATC TCGCAGTAGG AGCGATGACC
ATCTTAGCCA GTATCATGCA ATTTTCAATG TTACCACTCC AAGGACTTAC CCAAGGTGCC
CAACCGATTA TTTCTTATAA CTTCGGAGCA GGTAATATTG ACCGTATAAA AAAGACTTTT
AAAATTTTGG TAACTTCCTG TTTGACTTAC TCCACATTGC TTTGGGCAAT TGCAATGTTT
GTACCAAAGC TATTTATTAT AATCTTTGCT AATTCACCAG AGCTTATTGA TTATACAGTA
TGGGCAGTTC GTATCTATAT GGCGACTTCT TGTATCTTTG GTATTCAAAT AGCATGCCAG
CAAACTTTTA TAGCGATAGG AAATGCAAAG ATTAGTATGT TCCTTGCTTT ATTAAGAAAA
GTGTTTTTAC TCATTCCACT TATCTTCATA TTACCAATCT TTATTGAAGA TAAAGTATTT
GCAGTTTTCC TAGCTGAGCC AATTGCTGAC TTCATAGCTG TTTCGACTAC AGCATCGATG
TTTATTTACA CCTTTAGGAA ACTTGGTGTG AATAAGGAAA ATGCTATAGA TGCTGCGAAG
TAA
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| Protein sequence | MNKQMSADLG NGKIGKLLFQ LSVPAIAAQI INVLYNMVDR AYIGHIPDIG TQALTGVGVT
MPVIMAISAF AALVAMGSAP RAGIMLGKKD PESAEKILGN SFFSLITVSI ILTAVILIFG
EPILMIFGAS ENTIGYGLDY LNIYALGTIF VQITLGMNAF ISTQGFAKTS MYTVAIGAII
NIILDPILIF GFDMGVKGAA LATILSQAVS CIWVIRFLIS DKSVLRIKKE NVRFTPKIML
PCIALGLSPF IMQFTEAVII VCFNSSLYKY GGDLAVGAMT ILASIMQFSM LPLQGLTQGA
QPIISYNFGA GNIDRIKKTF KILVTSCLTY STLLWAIAMF VPKLFIIIFA NSPELIDYTV
WAVRIYMATS CIFGIQIACQ QTFIAIGNAK ISMFLALLRK VFLLIPLIFI LPIFIEDKVF
AVFLAEPIAD FIAVSTTASM FIYTFRKLGV NKENAIDAAK
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