Gene Cphy_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3297 
Symbol 
ID5741576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4014600 
End bp4015616 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content32% 
IMG OID641294398 
Producthypothetical protein 
Protein accessionYP_001560390 
Protein GI160881422 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.016193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAA AAAAAATATG GCTCCTAGTT AGCTTATTTC TAATATTGAT GTTAAGCGGA 
TGCCAGGGAA AGTTTTATTT TACGACTGAC AGTGAACGTT ATACTGAAGA TAATATGAAG
TATTTTGGAA CTGTTAAGGA ACCAATCGAG GAGATTTCTA CAATTAATGT AAACACACAG
TATGCAGACT TTGATATAAT AGCATCGGAT GGATATTACG TGGAATATTC TTATTATTAT
GTCAATGAAG AACCAGTTAT TTCAATAATA GATGGTATAT TAACTTTTAA TGATAGTAAT
ATGAATCAAG GTGGTTATTC CATTAGCCTA AAAAAGTCGA ATTATTTTAA ACTATATATT
CCTGCATCCG CAGACTTTAA TAAAGTTAAT ATTACAGTAT CAAGCGGTAA TGTTTCAATG
GGAAGCTTTT CTGCTAAGGA TGTAAAGGTA GAAAATTCGT ATGGAGATAC CATAATAACA
TCAACAGCAA TTGATAAGCT TACCACTGTG GCTTCTTCTG GTGATCTTAC TATTGATAGG
AGTGCAATCG GAGAAGCAAA TATCAAGAAT AGCTATGGAG ATATAGTGAT AAAAAATATA
AATGAAGAAG ATTTTTTTAC AAAAGAATAT CCAGATGCTA GCATAACTGT GGAACTTAGT
AGCGGTAGTT TGAAGATAGA TAAGCTAAAA ACAAAGGAAT TACAATTTAA TAATTCTTAT
GGAGATGTTA AGATAGACGA ATCTACAATT ACTTCCCTAA AAGGAAAATT AAGCAGTGGA
GATGCCACCG TTGAGGATAG TTCTGTTGAT AAGATAGATA TCAATAATTC TTACGGTAAG
GTAAATTTAC ACTTAATAGG GAAACAAGAA GATTATTGCC TTGATATTAC TTCAAAGTAT
GGTGATGTCT GGGTTGGAAA GAAAAAATAT GACGGTTCGG TTCTCGTAGA CAAAGGTGGA
ACGAAGCGTA TTACATTGTA TTTATCAAGT GGTAGTGCAA AAGTTACTTT TCAATAG
 
Protein sequence
MKQKKIWLLV SLFLILMLSG CQGKFYFTTD SERYTEDNMK YFGTVKEPIE EISTINVNTQ 
YADFDIIASD GYYVEYSYYY VNEEPVISII DGILTFNDSN MNQGGYSISL KKSNYFKLYI
PASADFNKVN ITVSSGNVSM GSFSAKDVKV ENSYGDTIIT STAIDKLTTV ASSGDLTIDR
SAIGEANIKN SYGDIVIKNI NEEDFFTKEY PDASITVELS SGSLKIDKLK TKELQFNNSY
GDVKIDESTI TSLKGKLSSG DATVEDSSVD KIDINNSYGK VNLHLIGKQE DYCLDITSKY
GDVWVGKKKY DGSVLVDKGG TKRITLYLSS GSAKVTFQ