| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3277 |
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| Symbol | |
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| ID | 5741556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3987515 |
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| End bp | 3988447 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641294378 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001560370 |
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| Protein GI | 160881402 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0377359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA GGGTATTATC AATTATTATT TGCTTATGTA TGTTTTTTGT GGCAGCATGT
TCTAAAGATA CGGCTACAGG TGGATCTAGC ACGAAAGGCA AAGATAATAA ATACAAGGTA
TATTTAATAA CGATGGATCA GATGGATCAA CATTGGGTTA ATGTAGATGC AGGATGTAAA
AAAGCAGTGA AAGAGCTTGG CAATATTGAT TATGAATGGT TAGCTCCTGA CGTGAAAGAC
GATGCAAAGC AGATTGAGTG TATCAATAAT GCTGTAGCAG GCGGAGCTAA CGCTATCCTT
CTTGCAGCAA ATGGTCCTGA TGCAGTTACC TCTGCATTAA AAGAAGCACA ATCAGCAGGC
GTAAAAATCA TCTATGTTGA CTCAGCAGCT GATTATCCAG CTATTCAGAC ATTGGCAACT
GATAATGAAG CAGCAGGTAA AACTGCCGGG GAAGAGATGA TGAAAGGCCT AACAGCAGCA
GGAATAAAAG AAGGGAAAAT TGGTATTGTT AATGTTAATG CAGCTACAGC ATCATGTGTA
GCCCGTGAAA AAGGTTTCCG TTCTGCATTT GAAGGAACCT CCTTTGAATT ACTTGGGACA
CAATATGGTG AAGGCGATGC AGCTAAATCT AAGGATATAG CAGCGAACTA TATAACTTCA
AGTTGTGTTG GCTTATTTGG TGCAAATGAA GGTTCTACCG TAGGTATTGG TATTGCAATT
GAGGAAGCAG GAGAAAAGAT TATTGGTGTG GGATTTGATA AATCAGATAC AATCCTTGAA
TTAATTAAAG GCGGACATCT CCTTTGTACT ATGGCTCAAA ACCCTGATGT AATGGGCTAT
GAGGGTATGA AAACAGCAGC AAAAGCATTG GCTGGTGAAA AAATAGGAGA AACTAATATT
GATACAGGAG TATCCGTTAT TACAAAGGAT TGA
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| Protein sequence | MKKRVLSIII CLCMFFVAAC SKDTATGGSS TKGKDNKYKV YLITMDQMDQ HWVNVDAGCK
KAVKELGNID YEWLAPDVKD DAKQIECINN AVAGGANAIL LAANGPDAVT SALKEAQSAG
VKIIYVDSAA DYPAIQTLAT DNEAAGKTAG EEMMKGLTAA GIKEGKIGIV NVNAATASCV
AREKGFRSAF EGTSFELLGT QYGEGDAAKS KDIAANYITS SCVGLFGANE GSTVGIGIAI
EEAGEKIIGV GFDKSDTILE LIKGGHLLCT MAQNPDVMGY EGMKTAAKAL AGEKIGETNI
DTGVSVITKD
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