Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3268 |
Symbol | |
ID | 5741547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3975289 |
End bp | 3976851 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641294369 |
Product | ABC transporter related |
Protein accession | YP_001560361 |
Protein GI | 160881393 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00516012 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGACT ATATTATTGA GATGCTCCAT ATCACAAAGG AGTTCCCTGG AATTATAGCA AATGATGATA TCACACTCCG CCTAAAAAAG GGAGAGATTC ATGCACTGCT TGGAGAAAAC GGTGCTGGGA AATCAACTCT TATGAGTGTG TTATTTGGTT TATATCAGGC GGAAAAAGGC GAAATTAGAA AGAATGGCCA ATTAATTAAG ATTAATAACC CAAATGACGC CAATGCATAT GGTATTGGTA TGGTTCATCA GCACTTTAAG CTGGTGGAAA TTTTTACTGT TCTAGAAAAT ATTATCTTAG GTGTAGAACC TAATACGATG GGCTTTCTCG AGAAAAAGGA AGCAAGAAAA AAAGTATTGA GCCTATGTGA GCAATATGGG CTTAAAGTTA ACCCAGACGC AGTAGTAGAA AGTATTTCAG TTGGAATGCA ACAGCGTGTA GAGATTTTAA AGATGCTCTA CCGAGATAAT GAGATTTTAA TATTTGATGA GCCTACGGCG GTATTGACCC CACAGGAAAT CGACGAACTT ATGGAAATAA TGCGAGGCTT TGCGAAAGAA GGAAAATCCA TCTTATTCAT CACTCATAAG CTAAATGAGA TTATGGCGGT GGCTGACCGT TGCTCAGTTT TGCGTAAAGG TAAATATATA GGAACTGTTG ATATTAAGGA TACAACCAAA GAGGAATTAT CAAGGATGAT GGTTGGACGA GATATCAGTT TTTCAGTTGA GAAAGACGAG GCAACACCTG CTGAGGTTGT GTTATCGGTA CGTGATGTTA CAGTACCATC TAAAATTCAT AAAAATAATG CAGTAAAGAA TGTATCCTTT GATGTTCGTG CAGGTGAAAT TGTTTGTCTG GCTGGTATTG ATGGTAATGG ACAGACAGAG TTTGTTTCCG CATTGACAGG ATTAGATAAA ATGTCTGGCG GTAACGTCAC ATTGTGCGGA AAAGACATCA CCAAGGCGAA TATTAGAACA AGATCGAAAA CAGGAATGAG CCATATTCCA GAAGACCGCC ACAAGCATGG GTTGGTTCTT GAGTATACCC TGGAAGAAAA TATGGTATTG CAACGTTATT GGGAACCAGC TTTCCAGAAA AAAGGTTTTA TACGGAAGCA TGCAATTCGC CAATATGCAG ACAAACTGAT TAAACAATAC GATGTCAGAA GTGGTCAGGG ACCGATCACA ATTGCACGTA GTATGTCAGG CGGTAATCAG CAAAAAGCGA TCATCGCTCG TGAGATTGAC AAACAACATG AACTTCTAGT TGCTGTTCAG CCAACCCGCG GACTTGATGT CGGTGCGATT GAATATATAC ATAAGCAACT GGTAGCAAGA AGAGATGCGA ACAAGGCGGT TTTATTGGTA TCTTTAGAGC TTGAAGAAGT AATGAATGTA AGTGATCGTA TCTTGGTTAT GTATGAAGGT GAAATTGTTG GCGAGCTTAA TCCTAAGACT ACAACAGTAG AGGAACTTGG TCTTTATATG TCTGGTGCCA AACGTATGAA TGTGACACCA AAGAAGAAGG AGGAATCAAG CGCCAATGAA TAA
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Protein sequence | MEDYIIEMLH ITKEFPGIIA NDDITLRLKK GEIHALLGEN GAGKSTLMSV LFGLYQAEKG EIRKNGQLIK INNPNDANAY GIGMVHQHFK LVEIFTVLEN IILGVEPNTM GFLEKKEARK KVLSLCEQYG LKVNPDAVVE SISVGMQQRV EILKMLYRDN EILIFDEPTA VLTPQEIDEL MEIMRGFAKE GKSILFITHK LNEIMAVADR CSVLRKGKYI GTVDIKDTTK EELSRMMVGR DISFSVEKDE ATPAEVVLSV RDVTVPSKIH KNNAVKNVSF DVRAGEIVCL AGIDGNGQTE FVSALTGLDK MSGGNVTLCG KDITKANIRT RSKTGMSHIP EDRHKHGLVL EYTLEENMVL QRYWEPAFQK KGFIRKHAIR QYADKLIKQY DVRSGQGPIT IARSMSGGNQ QKAIIAREID KQHELLVAVQ PTRGLDVGAI EYIHKQLVAR RDANKAVLLV SLELEEVMNV SDRILVMYEG EIVGELNPKT TTVEELGLYM SGAKRMNVTP KKKEESSANE
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