Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3257 |
Symbol | |
ID | 5742036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3961410 |
End bp | 3963032 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641294358 |
Product | hypothetical protein |
Protein accession | YP_001560350 |
Protein GI | 160881382 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGTTAA ATCATAACAA TGTTAAGAAA ATAATGTTAA TAATTACCTT TACCGTTTTG TTATATGTTG GAATACAGCA CTTTGACGTG ATATTGATGA CTTTTAAGTA TATTCTTGGT ATTCTAACAC CATTTATCTT AGGTGGATGT ATCGCATTTA TCTTAAATGT ACCTTTGTGT TTATTTGAAG ATAAATTATT TCGTAAAGGA AAAACAAAAA ATCGTTTTGT TAATAAAATA AGACGACCGG TAAGTATTTT ACTAAGCATT ATATTAGTAG CTAGTATTAT ATTCACAGTT ACTTTTCTAA TCATTCCAGA GTTAGGGAGC ACTTTTGGTG ATCTAGCTGA TACGATTACT GTTTTTGTTC AGGACGCACA AAAATGGGTG GAAATTAAAT CAGCGGATTT ATTAATTCAG TATCCGGAAA TAGGAAACTC TTTTAAGGAA TTCTCGAAAG ATTGGGCTAA TCTAAGTGCT GGTTTAGTTA GTATATTAAA AGGTCTTGTT TATGGAGTTT TGGGGTCTGC TTTTAGTATC ATTTTGAATA TTATAAGTGG TTTAACTACT TTCTTTATTG GCTTTGTATT TGCAGTGTAC ATTTTGGGTA ATAAAGAAAA ACTTTCGGAA CAAGGAAAGA AGCTTTGCTA CAGTTTTCTT TCTCTAAAAA GAGCAGATAG AACAATCATG GTATTACAAT TAGCACATCG AACTTTTTCG AATTTTTTAT CTGGACAGTG CATTGAAGCT GTGATATTAG GTTCTATGTT TTATATAACT TTGAGCGTTT TACGTTTTCC ATATGCTTTA TTGATTGGGG TATTAATTTC ATTTACTGCA TTGATTCCTA TAGTTGGTGG GATAATTGGT TCTATCATTG GAACCTTTTT AATCTTTATG GTTAATCCAG TTCAGGCATT ATGGTTTATT GTTATCTTTA ATGTATTACA ACAGATTGAA GGGAATTTAA TCTATCCTCG TGTCGTTGGA GGGTCGGTTG GGCTTCCATC GATTTGGGTA TTGTTTGCAG TAACAATTGG CGGTAGTCTA ATGGGTATTC TAGGCATGTT AATCTTTATT CCACTAACAT CAGTTGTCTA TACCCTGTTG CGTGAAAATG TGAAGGTAAG ATTAAACCAA CGACAAATAC CAGAGGAGAA ATATTTATAT CCACCTAATA ATTCTCAGGT TCCCAAAAGT GAGACATTAG AACATGGAGA GAAGAATTGG ACAGCTAGAA GATTTAGTAA AACAGATGTA CTGTCAGTAG AAGGTAATAG TAATAAAACA GGGAAAGAAA AATTAAATAA ATCTATAAAA GATGAGTCAA GAAAAGATGA GTCAAGAAAT GATGAGTCAA GAAATGATGA GTCAAAAAAT GATGAAGTAA GAACTAAAGA ATTAAGAGAT AATAAAGTAA GAAATAATAA AGTTAGTAAA GAAGAAATAA GAAAAGTTGA AGTTAAAGAA GATGTAAACT CGGATAAGAA AAATTTAATG AAAAGTAATA ATCATAGTAA TGTAGGCAGT ATTACCAAGG AGTTACCAAG ACAAAAGGAA ACTCACACCA TGGAGAAAAA GAATTACGGA CAATTAGAAC GAATTTCAAA GGATGAAAAG TAA
|
Protein sequence | MELNHNNVKK IMLIITFTVL LYVGIQHFDV ILMTFKYILG ILTPFILGGC IAFILNVPLC LFEDKLFRKG KTKNRFVNKI RRPVSILLSI ILVASIIFTV TFLIIPELGS TFGDLADTIT VFVQDAQKWV EIKSADLLIQ YPEIGNSFKE FSKDWANLSA GLVSILKGLV YGVLGSAFSI ILNIISGLTT FFIGFVFAVY ILGNKEKLSE QGKKLCYSFL SLKRADRTIM VLQLAHRTFS NFLSGQCIEA VILGSMFYIT LSVLRFPYAL LIGVLISFTA LIPIVGGIIG SIIGTFLIFM VNPVQALWFI VIFNVLQQIE GNLIYPRVVG GSVGLPSIWV LFAVTIGGSL MGILGMLIFI PLTSVVYTLL RENVKVRLNQ RQIPEEKYLY PPNNSQVPKS ETLEHGEKNW TARRFSKTDV LSVEGNSNKT GKEKLNKSIK DESRKDESRN DESRNDESKN DEVRTKELRD NKVRNNKVSK EEIRKVEVKE DVNSDKKNLM KSNNHSNVGS ITKELPRQKE THTMEKKNYG QLERISKDEK
|
| |