| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3210 |
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| Symbol | |
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| ID | 5741988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3913601 |
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| End bp | 3915310 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641294310 |
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| Product | putative multiple sugar transport system substrate-binding protein |
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| Protein accession | YP_001560303 |
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| Protein GI | 160881335 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000204614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GATTTTTGTC ACTGTTTTTA GTACTAATGC TAATGGCTTC TTTAGCAGCA
GGATGCAGTA AAAAGGTGGA CGATACGAAA GATGTAGACA ATTCTAAAGT TGAAGCAACA
AAAAAACCGG AAAATACAAA AGCACCAGAT AAGCAAGAAA TTAAAGAATT CACTGCATTT
TTCGCAGTAC CTGGAACTGA AATCAACAAC AATAATGTTG CTATGGAGAA ATTAGCTGAG
TTAACAGGAG CTAAGTGTAA AGAGACTTGG TTAACTGGTC AGACAGCAGA AGAAGCAGTT
GGTACATTAA TTGCTGGTGG TGAATACCCA GATTTTATTT GCGGTTCTAC AGGTCATGCT
CAGTTATTAG AAGCAGGTGC CTATATTGCA ATTGATCAGT ATTGGGATAA ATACCCTAAT
ATTAAGAATT ACTTATCAGA GGAAGAGTGG AATAAAGTTA GAGCAGAGGA TGGACATGTG
TATATCATTC CTCAATTTGG TATTATTAAT GAAAAAGATA CCGAATGTGT ACATAATGAC
GAAGCATTTT GGATTCAAAC AAGAGTATTA AAGTGGGATA ATTACCCTAA GATTACAACT
CTTGATCAGT ATTTTGACTT GATAGAAAGA TATATTGCAG CAAATCCTAC TATGCCTGAT
GGAACTGCAA ATATTGGATA TGAAATCTTA ACTGATGACT GGAGATATTT CTGCTTAGAG
AATGCACCAT TTTTCTTAGA TGGTTATCCT AATGATGGTT GCTGTATAGT AGATCCAGTA
ACTTTAGAGG TTTCTGATTA TAATACAACA GATACTGCAA AGAAGTACTT TGCAAAACTT
AATGAAGAGT TTAAGAAGGA AATTATCGAT CCTGAAACTT TTACAATGTC TTATGACCAG
TATATAGCAA AGCTATCTTC CGGTCGTGTA TTAGGTATGG TTGACCAACA TTGGAACTTC
CAGCAGGCAG AAGATGCAAT CAAGACACAG GGCTTAGATG ATTGTACTTA TATACCATTA
GGAATTGTTA TGAATGAAGG AACAAAAGAT CGTTACCATT CAGCAAGTGC TCTCGATGTT
TCTAACGGTT TAGGAATTAC AGTAAGCTGT AAAGATGTTG AAGGTGCAAT GAAGTTTATG
GATGATTTAT TATCACAGGA AGCATTAACA CTTCGTTTCT GGGGTATTGA AGGGCAAGAT
TATATGGTTG GCGACGGTGG AGTTTTCTAT CGTACAGACG AACAACGTAA TAATGCAGTA
AGTCAGGATT ATCAGGTAGC TAATTTATGT AAATACTCAT ATTTCCCACA ATTAGAAGGT
ATGAATCGTG ATGGTATTAA TGCATGGGAA CCAGGCAGTC AGCCAGGAGA GTTCTTTGAT
GCTCTTAAGC CAGAGGTTCA GGAATGCTTA AAGGCATATG GTGCAGAAAC CTATGTTCAG
TTGTTAAATC CAGCAGGAGA AAATTCACCT TGGTTCCCAA TGTGGTCTTA TTCTAATACA
TTTACCTCAG ATACAGATCA TGGTATGGCA AAGGTAAATA TGGATGAAGT TAAACACGAG
TATTTACCAA AGGCTGTTAT GGCGAAAGAC TTTGAAGCTG CTTGGCAGGA TTACATGAAA
GTTTACAGCG ATAGAGTAAA TATTGATGCT TACTTAAAAG CTATAAAAAC TGAAGTTGAA
AGAAGAATAG CTGTTGCAGA AGGCAAATAA
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| Protein sequence | MKKRFLSLFL VLMLMASLAA GCSKKVDDTK DVDNSKVEAT KKPENTKAPD KQEIKEFTAF
FAVPGTEINN NNVAMEKLAE LTGAKCKETW LTGQTAEEAV GTLIAGGEYP DFICGSTGHA
QLLEAGAYIA IDQYWDKYPN IKNYLSEEEW NKVRAEDGHV YIIPQFGIIN EKDTECVHND
EAFWIQTRVL KWDNYPKITT LDQYFDLIER YIAANPTMPD GTANIGYEIL TDDWRYFCLE
NAPFFLDGYP NDGCCIVDPV TLEVSDYNTT DTAKKYFAKL NEEFKKEIID PETFTMSYDQ
YIAKLSSGRV LGMVDQHWNF QQAEDAIKTQ GLDDCTYIPL GIVMNEGTKD RYHSASALDV
SNGLGITVSC KDVEGAMKFM DDLLSQEALT LRFWGIEGQD YMVGDGGVFY RTDEQRNNAV
SQDYQVANLC KYSYFPQLEG MNRDGINAWE PGSQPGEFFD ALKPEVQECL KAYGAETYVQ
LLNPAGENSP WFPMWSYSNT FTSDTDHGMA KVNMDEVKHE YLPKAVMAKD FEAAWQDYMK
VYSDRVNIDA YLKAIKTEVE RRIAVAEGK
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