| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3175 |
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| Symbol | |
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| ID | 5743263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3878837 |
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| End bp | 3879739 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641294276 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001560269 |
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| Protein GI | 160881301 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0277511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTCAGC AATTAAATGT TTCACGTACA GGATACTATA AGTGGTTGAA TCGTGAACAG
CCAAAAGAAG AGATTGAAAA CGAAAAGATA GCTCTATGGA TCAAGGAATA CGATGAAAAG
TTCAAACATA CTTTAGGCTA TCGTAGAATG CGTAATTACA TTAACCGAGA TAAAAACAAG
CATTATAGTA AAGGTAGAAT ACAACGTATT ATGCGTGTAT ATGGCATCAA ATCTGTAATT
AGAAAGCAGC GAAAACCGTA TCGTTATTCA ACACCAGAAA CAACTGCTGA AAATATTTTA
CATAGGGAAT TTGAGGCTTC AAAACCTAAT GAGAAATGGG GAACAGATGT TACAGAATTC
AAAGTGCCTA TGAGTAATAG GAAAGTACAT TTAAGTGCCA TTCTAGATTT TTATGATAAG
TCAGTAGTGT CATATGTACT AAGCAACCAC AATGATAACA AGCTTGTTTT TGATACATAT
GACTTAGCAC TTAAATCTAA TCCAGATGTC ACACCCCTCT TTCATAGTGA TAGAGGATTT
CAAAATACAA ACAAAGTTTT TCAGAAGAAA CTTTTGAATC AAGGAATGAC TCAATCTATG
TCTCGTGTTA GTTGCTGTAT TGATAATGGT CCAACAGAAG GTCTTTGGGG AATTATCAAA
TCTGAAATGT ATTATATATC AGATTTCGCT GATGAAAACG AACTTTGTCA GGCAATCGCT
GAATATATAG AATACTATAA CAATGGACGA TATCAGGAAC GCTTTAGTAA CTTAGCACCA
ATGGAAGTTC GGAAGGCGGC TATCAACTCA GAGTTTCCAG TTAAATATCC AATACCAGAA
AACAAAAGAA TTCTTGCTTA TAAAGCAGAA TTAGAAGCAA AGAAAAAGGA ACGAATCGCA
TAA
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| Protein sequence | MCQQLNVSRT GYYKWLNREQ PKEEIENEKI ALWIKEYDEK FKHTLGYRRM RNYINRDKNK
HYSKGRIQRI MRVYGIKSVI RKQRKPYRYS TPETTAENIL HREFEASKPN EKWGTDVTEF
KVPMSNRKVH LSAILDFYDK SVVSYVLSNH NDNKLVFDTY DLALKSNPDV TPLFHSDRGF
QNTNKVFQKK LLNQGMTQSM SRVSCCIDNG PTEGLWGIIK SEMYYISDFA DENELCQAIA
EYIEYYNNGR YQERFSNLAP MEVRKAAINS EFPVKYPIPE NKRILAYKAE LEAKKKERIA
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