| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3174 |
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| Symbol | |
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| ID | 5743262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 3877669 |
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| End bp | 3878511 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294275 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001560268 |
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| Protein GI | 160881300 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3708] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.626893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGC TTGAGAATAT GAAAAATGCG ATTAATTATA TTGAAGATAA TCTTGAAGCT
GAAATTGATT ACGTAAAGGT TGCCCAAATA GCATTATGTT CCCAATATCA CTTTCAACGC
ATGTTTGCTT TTCTTATCGG CGTACCGCTA TCCGAGTATA TACGCCGTCG CCGATTAACG
CTTGCTGCCT TTGATTTGCA GAATAGTAAT GAAAAAATTA TCAATCTTGC TTTGAAGTAT
GGCTATAACT CGCCTGACTC GTTTTCTCGG GCATTTATGG CAATGCATGA AGTTACACCC
TCAAAAGCAA GAGAAAAGGG CATATCGCTA AAAGCGTATC CTCGTGTAAC GTTCTCCTTA
TCAATAAAAG GAGTGGTTGA GATGAACTAC AGAATTGAGC AAAAAAATTC ATTTACTGTT
GTAGGTGTAA AACAGAGGTT TTCACATATT AATGGTTTAG GTGAAAGTAT TGGTAAAATG
TGGAGCGAGA CACCACAAGA AACTATTTCA CAAATTGCTG GACTTGGAAA CGGGTTAGTA
GGCGTGTACA GTGGAATGTA TGAAGATAAT ACAACTGATT ACTATATTGC CGCGATAACT
GAAAGCGATT CCCCAGAAAC TTTGTGCAAG CTTGAAATAC CATCTCTTAC ATGGGCAATA
TTTGAAATAA TCGGCCCTAT GCCTACTGCA ATGGCAGAAA TATGGGGACG AATTTTTTCC
GAATGGTTTC CTACATCTGG ATATGAGCAT GCAGAAGCAC CAGAAGTAGA ATGGTACTCA
AACGGTGACT TGAGTTCGTC TGATTATAAA AGCGAAATAT GGATACCCGT TATTAAAAAG
TAA
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| Protein sequence | MDTLENMKNA INYIEDNLEA EIDYVKVAQI ALCSQYHFQR MFAFLIGVPL SEYIRRRRLT
LAAFDLQNSN EKIINLALKY GYNSPDSFSR AFMAMHEVTP SKAREKGISL KAYPRVTFSL
SIKGVVEMNY RIEQKNSFTV VGVKQRFSHI NGLGESIGKM WSETPQETIS QIAGLGNGLV
GVYSGMYEDN TTDYYIAAIT ESDSPETLCK LEIPSLTWAI FEIIGPMPTA MAEIWGRIFS
EWFPTSGYEH AEAPEVEWYS NGDLSSSDYK SEIWIPVIKK
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