Gene Cphy_3158 details

Gene Information

• Locus tag: Cphy_3158
• ID: 5743245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 3855356
• End bp: 3857410
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641294258
• Product: Alpha-glucuronidase
• Protein accession: YP_001560252
• Protein GI: 160881284
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3661] Alpha-glucuronidase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAG AAGTAGTATT AACTTTTAAT ATAAAAAAAG GAGATGGAAC AATGGGGTTT 
GAAAAAGCTT GGTTAAATTA CTATAAGAGT GATAATCTTG CGATGCGAGA TTATTTTACA 
GTCGTTACAT ACAATAAAGA CGACTCTATT GTAAAAAGTG CGGTCTTAGA ATTAACAACA 
GCAGCAAAAG AGCTATTTTC AATCGATATC GAAAGCAGCC TTTGTGATAT GAAATCAGAT 
GTTGATAAAA CGAGAAAAGG GATTCATTTT CAGATTGGTG ATAATAAAGA TCTAGAAAAT 
GAGGGATATC GTATTTCGTT AGCAGACGAG ATGCTATTGA TAGAGGCTTA CACCTCAAAT 
GGTATTCTCT ATGGAACTTT TGATTTGATT CGTAGCACCA TTCTTGGAGC AGATGTGCAT 
TCCTTCAATA GAACTATCTT TCCAAAGAAT CCTCTTCGAA TGTTAAATCA TTGGGATAAT 
ATGGACGGTA GTATTGAAAG AGGTTATTCT GGTAATTCTT TCTTTTTTGA ACATGGTGAA 
GTTATTGTAA ATGAACGTAC TAAGGCCTAT GCAAGACTTG TTTCCTCCGT TGGTATAAAC 
GCAGTTGTGA TAAACAATGT AAATGTCCGT GGTACAGCAA CTAATTTAAT AACAAATCGC 
TACATAGATA AATTAAAACA AATCGGTGAA ATTTTTGCTT CTTATGGAAT TAAGCTTTAT 
CTTTCTTTAA ATTTTGCGGC TCCAATGGAA CTTGGTGGTT TAACTTCTGC TGACCCACTC 
GACGAGGAAG TACGTCTTTG GTGGAAGAAA GAAGTGCAAT TATTATTTAA AGAAATACCA 
TCCTTTGGCG GATTTTTAGT TAAGGCGGAT TCAGAAGGAA GACCAGGGCC ATTTACTTAT 
CAAAGAACCC ATGCAGAAGG TGCCAATATG TTAGCTGAGG CAGTAAAACC TTATGGAGGT 
TTGATTATCT GGAGATGTTT TGTGTATAAC TGCAAACAGG ATTGGAGAGA TATGAAAACC 
GACAGAGCAA GAGCAAGCTT TGATAACTTC CAATCATTAG ATGGTGATTT TGCAGAGAAT 
GTAATTCTAC AGGTGAAAAA CGGTCCGATG GATTTTCAGG TTAGAGAACC AATATCACCT 
TTATTCGGTG GTATGAAGAA GACAAATCTG ATGCTTGAGG TTCAGATAGC ACAGGAATAC 
ACAGGTCAGC AAAGACATGT TTGTTACTTG ATTCCGATGT TTAAAGAAAT CTTAAAGTTT 
AGAACTTATT GTAAAGAAGA AAATGATACG GTATTCGATA TCGTTAGTGG CAACACTTAT 
GGCAATAAAA ACGCTGGAAT GGCAGCAGTT GCAAATACAG GGAATGATGA TAACTGGACT 
GGTCATGACT TGGCAGCAGC GAATCTCTAT GGATATGGTA GACTGAGTTT TGATCCTGAT 
TTAACATCAG AGGAGATAGC AAAAGAATGG ATCACCTTAA CATTTGGCAT GAAGGAGCAT 
GTTATAGATT ATATATCCAA AATCCTAATG ATGTCCTGGC CAGCATATGA GAAATATACT 
TCTCCGCTTG GTATTGGATG GATGGTAAAT CCTTCTCATC ATTACGGACC TAATGTTGAC 
GGGTATGAAT ACGACCGTTG GGGAACCTAT CATAAAGCAG ACCATACAGC AATTGGTGTA 
GACCGAACCA AGAATGGAAC AGGATACACA ACACAGTATC ATCAGCCAAA CCAAGAGCTC 
TATGGAACAC CTGAAACATG CCCAGAAGAG TTGCTTTTAT TCTTCCATCG CATTCCATAT 
ACCTATCAGT TAAAGACAGG TAAGACCTTA ATCCAACATA TCTATGATTC TCATTTTGAG 
GGAGTAGAGG ATGTGGAAGA GATGGTTAAG TTATGGGAAG AACTAAAAGG AAAGTTGGAA 
GAAGTACCAT ATCACAGGGT ATTGCATAGA TTACAGGAAC AGCTGGAACA TTCGAAGGAA 
TGGAGAGACG TGATTTGTTC TTATTTTTAT AGGAAGACAG CGATAGGGGA TAAAAAGGGG 
AGGGAGTTAT ATTAA 

 

Protein sequence

MEEEVVLTFN IKKGDGTMGF EKAWLNYYKS DNLAMRDYFT VVTYNKDDSI VKSAVLELTT 
AAKELFSIDI ESSLCDMKSD VDKTRKGIHF QIGDNKDLEN EGYRISLADE MLLIEAYTSN 
GILYGTFDLI RSTILGADVH SFNRTIFPKN PLRMLNHWDN MDGSIERGYS GNSFFFEHGE 
VIVNERTKAY ARLVSSVGIN AVVINNVNVR GTATNLITNR YIDKLKQIGE IFASYGIKLY 
LSLNFAAPME LGGLTSADPL DEEVRLWWKK EVQLLFKEIP SFGGFLVKAD SEGRPGPFTY 
QRTHAEGANM LAEAVKPYGG LIIWRCFVYN CKQDWRDMKT DRARASFDNF QSLDGDFAEN 
VILQVKNGPM DFQVREPISP LFGGMKKTNL MLEVQIAQEY TGQQRHVCYL IPMFKEILKF 
RTYCKEENDT VFDIVSGNTY GNKNAGMAAV ANTGNDDNWT GHDLAAANLY GYGRLSFDPD 
LTSEEIAKEW ITLTFGMKEH VIDYISKILM MSWPAYEKYT SPLGIGWMVN PSHHYGPNVD 
GYEYDRWGTY HKADHTAIGV DRTKNGTGYT TQYHQPNQEL YGTPETCPEE LLLFFHRIPY 
TYQLKTGKTL IQHIYDSHFE GVEDVEEMVK LWEELKGKLE EVPYHRVLHR LQEQLEHSKE 
WRDVICSYFY RKTAIGDKKG RELY