| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3148 |
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| Symbol | |
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| ID | 5743234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3842841 |
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| End bp | 3843788 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641294247 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001560242 |
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| Protein GI | 160881274 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.444355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCACTT ATGTGCACAC TACTTTTTAC GGTTATCGCC CGGGAAGAAG TGCGAAAGAG
GCTATAATTA AGGTAAAAGA GTATGCACAA GAGGGTTATC GCTATGCGGT ATCACTAGAC
CTTTCAAAGT ACTTCGATAC CTTAAATCAT GAGTTGTTAC TGAACATACT TCGAAGAAAT
GTGAAGGATG AAAGGGTAAT ACAATGGATA AAGAGGTATC TTAAGAGCGG TGTCATGGAA
AACGGTATAG TCATGGACAC AGAGGAAGGT TCGCCACAAG GCGGAAATCT GTCACCACTA
TTGGCAAATG TTTATCTCAA TGAGTTTGAC CAAGAGTTCC AAAAGAGAGG TGTTCCGTTT
GTACGTTATG CAGATGATAT TGTTCTGTTA GCAAAGAGCG AGAGAGCCGC AAAGAGACTT
TTGGAGACAA GCACGAATTA TCTTGAAGGT AAGCTTAAGT TAACGGTGAA TAAAGATAAA
AGTCGTGTGG TTAGTGTGTT TGCAATCCGA AATTTTAAAT TCCTTGGCTT TGTATTGGGA
AGGAACGGAA ATGGCATATA TGTCAGAGTT CATCCGAAGT CATGGAAGAA GTTTAAATCC
AAGCTGAGAG AACTTTCTTC CCGAAGGTCG GTTCAGAGTA TAAGACCAGC ATTAGAAAAG
ATAAAGGTGT ATGCTAGAGG ATGGCTTAAC TATTACGGAA TAGCAAGTAT GAAGAACCCT
ATTGAGGACA TCAATGGTTG GCTCTACCAT CGGATTCGAA TGTGTATTTG GAAGCAATGG
AAGAGGTCTA AGACAAAGAT GAGAAACCTC TTAAAACTTG GAGTATCCAA AGACTTGGCA
TATAAAACGG CTAATAGCCG GAGAGGTTAT TGGTTTGTGA CACATATAGT GGCGGTCAAT
ATAGCTTTAA CAAAAGAAAG ACTGATACAC AGTGGCTTTA TGACTTAG
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| Protein sequence | MCTYVHTTFY GYRPGRSAKE AIIKVKEYAQ EGYRYAVSLD LSKYFDTLNH ELLLNILRRN
VKDERVIQWI KRYLKSGVME NGIVMDTEEG SPQGGNLSPL LANVYLNEFD QEFQKRGVPF
VRYADDIVLL AKSERAAKRL LETSTNYLEG KLKLTVNKDK SRVVSVFAIR NFKFLGFVLG
RNGNGIYVRV HPKSWKKFKS KLRELSSRRS VQSIRPALEK IKVYARGWLN YYGIASMKNP
IEDINGWLYH RIRMCIWKQW KRSKTKMRNL LKLGVSKDLA YKTANSRRGY WFVTHIVAVN
IALTKERLIH SGFMT
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