| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3118 |
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| Symbol | |
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| ID | 5743204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3814958 |
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| End bp | 3815668 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294218 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001560213 |
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| Protein GI | 160881245 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00259319 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTG CATACTGTGA TGATGAGAAA GCACAATATA TATTTTTAAA GGAGTTGACT
GATAAATGGG AGAGTGCTTC CGGAAAGAGC TGCGATATTG TAGTGTATGC CAGTGCGGAA
GAAATGCTTT TTGAGAACCA AGAATCCTTC TCCTTTGATT TTATTATCTT GGATATCGAA
TTAGGCCAGA TGAATGGAGT GGATTTGGCA AGGAAGATTC GAAAGATAGA TAAGAAGGTA
ACCATAGCCT TTTTGTCAAA TAGCAGAGAG TATGTATTTG AGGGCTATGA GGTAGGGGCT
GCCAGGTATC TGATGAAGCC TCTTACAAAG CAACAGCTTT TTCCCCTCCT AGATATGGTA
CTAAAATCCT TGGAAGAAGA AAAGAGCTAT ATTATTTTAG GAAGTGCAGG AGAGAAGGTT
AAGCTTATGC ATAGTGATAT CTGCTATATA GAAGCTCTTG GCCATTATAT TCAGATACAT
ATGGCAGACA AAAACCTTGA GGTAAAAAAG AATATCAATG AGATCGCAAA AGAACTGGGG
AAAGATTTTA TTGCTACCCA TAGAAGCTAT CTGGTAAATG TAAGCCAGAT AGAGAGAATA
ACAAGAACGG ATTGTATCTT AAGCAGTGGA GAGAAGGTAC CAATCAGCAG GAATTCCTAC
GAAGCAGTCA ACCAGGCGTT TATTAACTAT TATAAAGGAG GAGAACTTTG A
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| Protein sequence | MRIAYCDDEK AQYIFLKELT DKWESASGKS CDIVVYASAE EMLFENQESF SFDFIILDIE
LGQMNGVDLA RKIRKIDKKV TIAFLSNSRE YVFEGYEVGA ARYLMKPLTK QQLFPLLDMV
LKSLEEEKSY IILGSAGEKV KLMHSDICYI EALGHYIQIH MADKNLEVKK NINEIAKELG
KDFIATHRSY LVNVSQIERI TRTDCILSSG EKVPISRNSY EAVNQAFINY YKGGEL
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