| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3108 |
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| Symbol | |
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| ID | 5743194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3799364 |
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| End bp | 3801211 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641294208 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001560203 |
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| Protein GI | 160881235 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAG AGAAAAGAAT TGTTCTTCTT TTACTTTGTT TTAGTTTACT GTTTGTATCA
GGATGCTTCG GGACAAGTAA AATAGTAGAT AATGAGGAGT CGACCTATCG TTTGTTGTAT
TCCTCTGAGG TTTCTACCTT AAATTATCTC GTTACCTCAT CTTCTCATGA AATACGAGTT
GGTGCTAATG TGATTGATAC TCTTGTGGAA TATGATTCCT TTGGTAATTT AATTCCTTCG
TTAGCGACAA GTTGGAAGGT AAGTGAGGAT GGACTTTCAG TTACATTCGA ACTTAGGGAA
GGAGAATACT GGGTAAATGA AAAAGGAGAA AAGATAGCAG AAGTAACTGC AAAGGACTTT
GTCAGTGCGA TGCAATATGT CTTAACCAAA GAATATGAGA GTGAGACTGC AAAGCTCTTG
TTTGGTTTAA TTAAGAATGC AAAAGATTAT TATGATAGAC AAGGAGACTT TAGAAGAGTC
GGAGTAAAAT CCTTTGGAAA CTATACATTA GTCTATACAC TAGAACAACC TTGCCCTTAT
TTCCTATCTT ACTTAACGTA TGGATGCTTT ATGCCAGCCT ATGGTCCTTT ATTAGACGAA
TTAAAAGAGC AATTTGGTGC AGCAACAGGA CCAGATACGC TCTATTATAA TGGAGCGTAC
AGACTATCTG TATTTAAGCC TCAAGAAAAA CGTATTTATC AAAAAAATGA AGAAAATTGG
GACGCTGATC GTGTTTATAT AAAAAGAATC GAAGAAACCT ATAACTCAGA GGCAGCAACC
TTGGCACCCG CACTTGCATT ACGCGGTGAA ATTGATTATG CAGCGATACA TTCTGATTTA
CTTGATACAT TTATGGATCA GGAAAATACA AAAGATCTGG TAAGTAGAGG TAGAAAAAAA
ACGGATTACT CCTTCTTTTA CATATTTAAC TTTAATCCGA AATTTGATAA ACGATATGAG
CCTCAGAACT GGAAAAAGGC AGTTCAGAAT GAGAATTTTC GCTTGGCTAT TATGAGTGCG
ATGGACCGAG TGAAAGCACT TCGAGTAGCC GAACCAAACC ACCCAGAAGA ACTTTTGTTA
AATACAATTA CCCCCCCTAA CTTCATTCGC TTTGAAGAGG AAGATTACAC AGAGTTTCCA
GCACTCTATG ATATATCCAA ACGAGATAGT TTTAATAAAG ATATGGCGGT TATCTATAAA
GAGAAGGCTA AGCAGGAGCT AAAAGAGGTA GGTTGTACCT TCCCGGTAAA GATTTTATTA
CGATATCGTG CTAATTCTAC CGACTGGGCA AATGAATGTA TTGTTATAGC ACAGCAGATG
GAAAATCTTC TAGGAAAAGA TTTTGTGAAA TTTATAGTAG AGGCTGGACC TTCTCAGAAC
TTTACTTCTC AAGTAAGGGA GAGAGGAGAT TATGCGATGT TAAAATGTAA CTGGGGAGCT
GATTATGCAG ACCCGCAGAC CTTTACAGAG TTTTTTGATG ATGACTTGGC AACGAATCTA
TTACCATCAA AGGAAGAAAA ACTATCCATC AAGCCTGTCA TTGATACCTA TTATGAGTTA
CTTACAAAAG CGAAAGAAAG TGTACTAGAC ATAAAAGAAC GTTATACAGC ATTTTCAGAG
GCGGAAGCTT TTCTGATTAA ACATGCATTA GTGATACCAT TTAGTATATC ACCGGTATCT
TATCAGATGA CAAAGTTAAA TATTTATGAA AGTTCCTATG CAAGTTTTGG AGTTTCTACC
TCAAGATACA AAGGGATGAA ATACTATAAA GTGATACTGA ATAACAAAAT AGTGGAAATT
AATAAGGCAG TTTGGGAGAA GGAGAAAAAA CAAAAGAAGG ATGGTTGA
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| Protein sequence | MKVEKRIVLL LLCFSLLFVS GCFGTSKIVD NEESTYRLLY SSEVSTLNYL VTSSSHEIRV
GANVIDTLVE YDSFGNLIPS LATSWKVSED GLSVTFELRE GEYWVNEKGE KIAEVTAKDF
VSAMQYVLTK EYESETAKLL FGLIKNAKDY YDRQGDFRRV GVKSFGNYTL VYTLEQPCPY
FLSYLTYGCF MPAYGPLLDE LKEQFGAATG PDTLYYNGAY RLSVFKPQEK RIYQKNEENW
DADRVYIKRI EETYNSEAAT LAPALALRGE IDYAAIHSDL LDTFMDQENT KDLVSRGRKK
TDYSFFYIFN FNPKFDKRYE PQNWKKAVQN ENFRLAIMSA MDRVKALRVA EPNHPEELLL
NTITPPNFIR FEEEDYTEFP ALYDISKRDS FNKDMAVIYK EKAKQELKEV GCTFPVKILL
RYRANSTDWA NECIVIAQQM ENLLGKDFVK FIVEAGPSQN FTSQVRERGD YAMLKCNWGA
DYADPQTFTE FFDDDLATNL LPSKEEKLSI KPVIDTYYEL LTKAKESVLD IKERYTAFSE
AEAFLIKHAL VIPFSISPVS YQMTKLNIYE SSYASFGVST SRYKGMKYYK VILNNKIVEI
NKAVWEKEKK QKKDG
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