Gene Cphy_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3103 
Symbol 
ID5743189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3793820 
End bp3794788 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content34% 
IMG OID641294203 
Productglycosyl transferase family protein 
Protein accessionYP_001560198 
Protein GI160881230 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.532387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAA ATAAGAATCT GGATGTGATA ATACCGCTGT ATAGACCGGA CAAGAAGTTT 
GATAAGCTAT TAATCCAGTT ATTAAAACAA ACCATAAAGC CTAAGAATAT ATGGCTTCTT
AATACAGAGG TATTACCAGA TTACGCAACA GAGGTAATCA AAAAAAGAGT TGATAAATTG
GTCTCTCGTA CAAAAATCGC AGGAAGTGAA TCTGTGGACA TTCATTTAAT TTCCATTGAG
CAATCAGAAT TTGACCATGG TGGTACAAGA GCATATGGTG CTAGTCTTTC AAATTCTGAA
TATATGGTAT TTATGACACA GGATGCGATT CCAAATAATG AATACCTATT AGAAAATCTA
ATAGAACCAT TCAAGATGGA GGAAGTCGCT GTTACTTATG GAAGACAGGA AGCAGCGCAG
AATGCTAAGT TAGTTGAAAA ATATACAAGA ATATTTAATT ATCCATCTAC AGATCAGATA
AAGTCAAAAG AGGATTTGGA TCGTCTTGGA ATTAAGACTT ACTTCTGTTC TAATGTATGT
GCAGCATACC GTAAGTCGGT TTATGAGGAT TTAGGAGGAT TTGTTGCAAG AACAATGTTT
AATGAAGATA TGATATATGC AGCAGGAGTA ATTAAGGCTG GGTATAAGGT TTATTATGCA
AGTAAAGCAA CTGTAACTCA TAGTCATCAT TACACATGGA TGCAACAACT CCGAAGAAAT
TTTGATTTGG GCGTTTCTCA AGAGGAGTAT CAGTCGATAT TTAAAAATAT CTCTTCTGAA
AAGGAAGGCA CAAAGCTAGT AAAGCAAACA ATTAGTTATT TAATGGATCA AAAAGAATAT
ATAGAATTGA TTGATTTTGT TCTAGAAAGT GGATTTAAAT ACTTGGGTTA TCTTCTTGGG
AAGCAACATC GATTATTACC ACAGCCATTC AAAGTATGGC TTAGTATGAA TAAGTCATAT
TGGAATTAA
 
Protein sequence
MDQNKNLDVI IPLYRPDKKF DKLLIQLLKQ TIKPKNIWLL NTEVLPDYAT EVIKKRVDKL 
VSRTKIAGSE SVDIHLISIE QSEFDHGGTR AYGASLSNSE YMVFMTQDAI PNNEYLLENL
IEPFKMEEVA VTYGRQEAAQ NAKLVEKYTR IFNYPSTDQI KSKEDLDRLG IKTYFCSNVC
AAYRKSVYED LGGFVARTMF NEDMIYAAGV IKAGYKVYYA SKATVTHSHH YTWMQQLRRN
FDLGVSQEEY QSIFKNISSE KEGTKLVKQT ISYLMDQKEY IELIDFVLES GFKYLGYLLG
KQHRLLPQPF KVWLSMNKSY WN