| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3084 |
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| Symbol | |
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| ID | 5743170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3773475 |
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| End bp | 3774659 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641294185 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001560180 |
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| Protein GI | 160881212 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAAGAG CATACAAAGT GGAATTAAAA CCAACGAACC AGCAGATACA GAAGATTAAT
CAATGTCTAG GTGTTTGCAG ATGGCTTTAT AACGCTTATC TTGCTAAGAA CCAATCACTT
TATCAAGACT TTAAAGAGGG TAAGCTTAAT AAGAAAAAAG CCTTTATGTC AGCCAATGAC
TTTGATAAGT ACATTAATAA TGATATTAAA GTTTTAGATG ATTGCAAGTG GATTAATGAT
TGTGGTAGTA AAGCTAGAAA AAAAGCTATT TGTAATGCAG AATTTGCGTA TAAGAAGTTT
TTTAAAGGTG AAGCACAATT TCCACGTTTT AAGAAGAAAG GTAAGTCTAA AGTAGGTCTA
TATTTTCCAA GGAATAATAA AACCGATTTC AAGATTGAAC GTCACAAAAT TAATATACCT
ACACTTAAAT GGGTTAGGCT TAAAGAATTT GGATATATCA AGGCCAATGC AAACGTCATT
AGTGGTACGG TCACAGAACA AGCAGGAAAA TATTATATCT CAATTGTTTG TGAAATAGAA
GAAGTTAAGA ACTCCTTGCC TAAAACAGAG CCATTAGGAC TAGATTTAGG AATAAAAGAT
TTTGCTATTT TTAGTAATGA AGTAGTTAAG AAGAACATCA ATAAGACTTC AAGAGTAAAG
AAATTAGAAA AGAAGTTAAA ACGTGAACAA GTAAGGCTTT CAAGGAAATA TGAATGTCTT
AAAAAACAAA ATAAAATAAG AAAAGGAGAG GCCACTAGAC AGAATATTCG TAAGCAAATA
GTCAAAGTAC AAAGACTTCA TCAAAGATTA GCGAACATTC GTACTGATTA CATTAATAAA
TGTGTATCTG AAATAGTTGG ACAAAAACCA AGTTCAATAA CTATTGAAGA TTTGAATGTA
AAAGGAATGA TGAAAAATCG ACACTTATCA AAAGCAGTCG CCGGGCAAAA GTTTTATGAG
TTCAGAATAA AACTTACCAA CAAATGTAAA CAAAACGATA TTGAACTTAG AATAGTAGAT
AGATGGTATC CATCTTCTAA GCTTTGCTCA TGTTGTGGAA ACGTCAAAAA AGACTTAAAA
CTTTCTGACA GAATTTATGT TTGTAAAGAG TGTGGTTTAG TAATTGATAG GGATTTACAA
GCTAGTATTA ATCTTAGAGA AGCAAAAACT TACAAGATAG CATGA
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| Protein sequence | MQRAYKVELK PTNQQIQKIN QCLGVCRWLY NAYLAKNQSL YQDFKEGKLN KKKAFMSAND
FDKYINNDIK VLDDCKWIND CGSKARKKAI CNAEFAYKKF FKGEAQFPRF KKKGKSKVGL
YFPRNNKTDF KIERHKINIP TLKWVRLKEF GYIKANANVI SGTVTEQAGK YYISIVCEIE
EVKNSLPKTE PLGLDLGIKD FAIFSNEVVK KNINKTSRVK KLEKKLKREQ VRLSRKYECL
KKQNKIRKGE ATRQNIRKQI VKVQRLHQRL ANIRTDYINK CVSEIVGQKP SSITIEDLNV
KGMMKNRHLS KAVAGQKFYE FRIKLTNKCK QNDIELRIVD RWYPSSKLCS CCGNVKKDLK
LSDRIYVCKE CGLVIDRDLQ ASINLREAKT YKIA
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