| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3062 |
|---|
| Symbol | |
|---|
| ID | 5743388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3744339 |
|---|
| End bp | 3745322 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641294163 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001560158 |
|---|
| Protein GI | 160881190 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000521678 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTAG CGAGCAGGAC CATTCGGCTA AGGTACGCTC ATGATCGTAG AATATACGGA
ACCGGGATAG GGGTAGCAAT TGTAGATACA GGGATATGTC AGCATCCGGA TTTTTTAAAA
AATTGTAATC GTAAAATTTA TTTTAAAGAC TTTATTCATC AGAGGACTTT AATGTATGAT
GACTGTGGTC ATGGAACTCA TGTAGCAGGA ATTATTGGAG GGAGTGGCTA TGCCTCTGGT
GGAAAATATA TAGGAGTGGC ACCAAACTGC AATCTGATTA TGGCAAAAAC CTTAAATTAT
AAAGGAGATG GCAATATATC AGATGTACTC ATAGCACTCG ACTGGATTGT GAAGCATAAG
GAAGAGCTTG GTATCCGAAT TGTAAACTTA TCTTTTGGAA TGGGCAACAA AGAAATTAGT
CAGGATGGCA GAAATTTAAT TAATGCAGTT GAAAATGTCT GGGATAGCGG AATCGTCGTG
GTAGCAGCAG CTGGAAATGG TGGACCGAAT TTAGGCAGCG TTGCAGTTCC TGGGAGTAGT
AAGAAAATAA TAACTGTAGG TGCGTCAGAT GATAATATTG AAGTTGACTT AATGGGAAAT
CGTGCGAGAA ATTACTCTGG AAGAGGTCCA ACTTTTGAAT GTATTAAAAA GCCAGATATC
GTTGCACCAG CAAGTAATAT TATGAGTTGC GCGCTAGCTA GGTCTTATGG AGCGGATAAG
TTTCGTGCAT TAAATAATAA TCACTTTTCT TCAGCTGCAA AGGATGGTAG GGAGCGATTT
GGAAATTTCT ATACTGAAAA AAGTGGAACC AGTATGGCAA CTCCAATTGT TAGTGGAGCA
ATTGCTTTGC TATTATCAAT TAAGCCAAAC TTGACGCCCA AAGAAGTCAA GATTAAGATA
CGAGATAGTT GCGTAAACAT TGGAGAACCA CAGAGTAAAC AAGGTTGGGG GCTATTAGAT
ATTGAGAATT TATTAAAGGC GTAG
|
|---|
| Protein sequence | MDLASRTIRL RYAHDRRIYG TGIGVAIVDT GICQHPDFLK NCNRKIYFKD FIHQRTLMYD
DCGHGTHVAG IIGGSGYASG GKYIGVAPNC NLIMAKTLNY KGDGNISDVL IALDWIVKHK
EELGIRIVNL SFGMGNKEIS QDGRNLINAV ENVWDSGIVV VAAAGNGGPN LGSVAVPGSS
KKIITVGASD DNIEVDLMGN RARNYSGRGP TFECIKKPDI VAPASNIMSC ALARSYGADK
FRALNNNHFS SAAKDGRERF GNFYTEKSGT SMATPIVSGA IALLLSIKPN LTPKEVKIKI
RDSCVNIGEP QSKQGWGLLD IENLLKA
|
|---|
| |