Gene Cphy_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3046 
Symbol 
ID5743372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp3724548 
End bp3725189 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content36% 
IMG OID641294147 
Producthypothetical protein 
Protein accessionYP_001560142 
Protein GI160881174 
COG category[S] Function unknown 
COG ID[COG4728] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAAA ATATACCACG GCCAGGACAA TTATATCAAC ATTTTAAAGG AATGTTATAT 
CAAATTATTA CGGTAGCCAA GCATTCCGAA ACAGGGGAAG AGCTTGTGAT TTATCAAGCA 
CTTTATGGCG ATTTTAAGAC ATTTGCAAGG CCTCTTTCTA TGTTTCTTAG CGAGGTGGAT 
CATGAGAAAT ATCCTAATGT TTCGTTGAAA TATCGTTTTA CCCCAATCTC ACGAGAAGAA 
CTCAGTAACG AGAATAGACA GAATAAGAAT ATGGATGCGA TGAGTAAAGC TGGAGCTATG 
GATGCTCAAG ATCAAGATGT AGCAGTACAA CAATTAAAAG ATGACGAGAT TTTAAATCAT 
GCGGTTAAGG GAGAACAAAC AAAAGCTACA GAAGGTTTAA AAAAGGATGA ACTACACCCG 
GAAGCAAATC TTGATTTAAT GGCATTTCTT GATGCAAAAG ATTGTGATGA GAAACTTGAA 
ATCTTATATA GCATGAGAAA GAGCATTGAT GAACGGACAA TGGGGAATAT TGAGATTGCT 
CTCGATTTGC CAGTCAATGA AGGAAGTATT GAACAGCGTA TTGATATAGT AAAAAATAAG 
TTACATGTGA TGGCAAAATA TGAAAATCGA CGACTTAGAT AA
 
Protein sequence
MEQNIPRPGQ LYQHFKGMLY QIITVAKHSE TGEELVIYQA LYGDFKTFAR PLSMFLSEVD 
HEKYPNVSLK YRFTPISREE LSNENRQNKN MDAMSKAGAM DAQDQDVAVQ QLKDDEILNH 
AVKGEQTKAT EGLKKDELHP EANLDLMAFL DAKDCDEKLE ILYSMRKSID ERTMGNIEIA 
LDLPVNEGSI EQRIDIVKNK LHVMAKYENR RLR