| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3038 |
|---|
| Symbol | |
|---|
| ID | 5743364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3714959 |
|---|
| End bp | 3715405 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641294139 |
|---|
| Product | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut |
|---|
| Protein accession | YP_001560134 |
|---|
| Protein GI | 160881166 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0756] dUTPase |
|---|
| TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000004053 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTAA CAATTAAGAT AAAAAAAGTA AAAGAGAATG CAATGTTGCC AACAAGGGGC
AGCGTAGAGG CAGCAGGATA TGATTTATAT GCGTGCCTAG ACACGGATGC TTGTGAAATA
AAACCACATG AAACTGTCAA AATAGGTACA GGGTTAGCAA TTGAAATTCC ATCCGGATAC
TTTGGTGGCA TATTCGCGCG AAGCGGAATT GCTGCAAAGA ACGGATTACG TCCTGCAAAC
TGCGTTGGTG TCGCGGATAG TGACTATCGT GGCGAATATA TCATTGCACT TCATAATGAT
ACCGATATAG TTCAAACGAT TGCAAATCAT GAACGTATTG CACAACTTGT GGTAATTCCT
TATCTATCGG TTGATTTTAC AGAAGTTGAG GAGCTATCAG ATACAGTACG TGGTGATGGC
GGATTCGGTA GTACAGGGAC AAAGTAA
|
|---|
| Protein sequence | MSVTIKIKKV KENAMLPTRG SVEAAGYDLY ACLDTDACEI KPHETVKIGT GLAIEIPSGY
FGGIFARSGI AAKNGLRPAN CVGVADSDYR GEYIIALHND TDIVQTIANH ERIAQLVVIP
YLSVDFTEVE ELSDTVRGDG GFGSTGTK
|
|---|
| |