| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2989 |
|---|
| Symbol | |
|---|
| ID | 5744051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3650329 |
|---|
| End bp | 3651438 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641294090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001560085 |
|---|
| Protein GI | 160881117 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000111252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATGAAC TTCAAGTAAT AGTAACACAG AAGCCTGCAG AGATTTCCTT CAACTTTGAT
GAAATCAAGC AGAGCCTTTC TGAACAGATG GAAATCTATA AATCTATGGA AGTAACGGAA
GAAGTCCTTG CCGAGCGTAA GAAAGATATT GCTACTCTTC GCAAGATAGC TAAAGCAATC
GATGATAAGC GCAAGGAAGT AAAAAGTAAC TACATGATTC CGTATGAGGA GTTCGAGAAA
AAGGCTAAGG AGCTTGTAGA GATTATAAAT GAGCCTATTG AGTTAATCAA TAAGCAAGTT
AAGGAATTTG ACGAAAAACA GAAGGCTGAG AAAAGACAAA AAGCTTTCGA TTATTATCTG
CAGAAGATGG GCGGTCAATC TGAAACCTTA GAGTTTGAAG AAGTTTTTAA GGATTCCTGG
CTCAATGTTA ATACATCTTT TAAATCTATC AAGAATGATA TTGATACAGC CTTATCTGAT
CGTTTAGCTG ACTTAGAGGC GATAGCTGCA AGGAAATCAG AGGTTGAAGA AAAAGCAATA
GCAGTTTATA AACAGACCAA GAAATTATCT GATGCTATGA AGATTATTAA TGATTATGAC
ATACAGAAAA AAGCTATTCT TGAAGCCGAA GAGCGTCGTA TACGAGCGGA AGAGGAACGC
AGAAAGCGAG AAGAAGAGCG TAAGGCTCGT GAGGAGCAAG AGCGTCTTTC CAGGGAACAA
AGAGAGCGCG AGCTTGCTGC AGAACGTGAA CGCCAGTCAG AGATAGATCG GATCCGCGCA
GAGGAAAGAG CAAAGGTACA GGAGGAAGTT TGTAGGCAAC AGGAAGAGAT TAGAAGGCGT
GAGGAATCTC AAAGAGTTAT TGAGAAAGAG GTATCTCCAT TTCCTATTGT AGAGGAAGTA
GATTTTCCTG GTTCACCTTT CCCTGTTATC GCTGACGAGA CACCTTTTCC TGCAGAAGAA
GTGAAAAAAG AAGAATCTGT TTTTGAAGTG AAACACACGC CAGTTAGTCA AGTGACTACT
GTTAGATATA TGGTTAAAGG AACTGAAGAA CAACATAAGC AAGTTGAGAA GATTCTTTCT
GAGCTTGGTG TACAGTTTGC AAAGTTATAG
|
|---|
| Protein sequence | MNELQVIVTQ KPAEISFNFD EIKQSLSEQM EIYKSMEVTE EVLAERKKDI ATLRKIAKAI
DDKRKEVKSN YMIPYEEFEK KAKELVEIIN EPIELINKQV KEFDEKQKAE KRQKAFDYYL
QKMGGQSETL EFEEVFKDSW LNVNTSFKSI KNDIDTALSD RLADLEAIAA RKSEVEEKAI
AVYKQTKKLS DAMKIINDYD IQKKAILEAE ERRIRAEEER RKREEERKAR EEQERLSREQ
RERELAAERE RQSEIDRIRA EERAKVQEEV CRQQEEIRRR EESQRVIEKE VSPFPIVEEV
DFPGSPFPVI ADETPFPAEE VKKEESVFEV KHTPVSQVTT VRYMVKGTEE QHKQVEKILS
ELGVQFAKL
|
|---|
| |