Gene Cphy_2987 details

Gene Information

• Locus tag: Cphy_2987
• ID: 5744049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 3649175
• End bp: 3649600
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 641294088
• Product: single-strand binding protein
• Protein accession: YP_001560083
• Protein GI: 160881115
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00344434
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAG TTATGATGAT TTGTCGATTG ACCAAAGATC CTGAGATTCG ATATGGACAA 
GCAAATGGAA CAGCGATTGC CTCCTACGGA ATTGCAGTAA ACAGACGATT TAAGCGTGAT 
GGTGAACCGG ATGCAGACTT TTTCAACTGT GTATGTTTTG GACGGAACGC CGAGTTTGCT 
GAGAAGTATC TTGCCAAGGG AAGTAAGATT GCTATTGTTG GTAGTATTCA GAATGAGAAT 
TATACCAATA AAGATGGTCA AAAAGTTTAC TCTACAAAAA TTCTTGTAGA CGAGATGGAA 
TTTGCAGAAA GTAAGAGCTC CGGAAGTGAC TATCAGCAAT CATCAAGACC TGCACCAAGT 
GAAGCTAGCG GTGATGGGTT TATGAACATT CCGGACGGCA TTGACGAAGA ACTACCATTT 
AATTAG 

 

Protein sequence

MNKVMMICRL TKDPEIRYGQ ANGTAIASYG IAVNRRFKRD GEPDADFFNC VCFGRNAEFA 
EKYLAKGSKI AIVGSIQNEN YTNKDGQKVY STKILVDEME FAESKSSGSD YQQSSRPAPS 
EASGDGFMNI PDGIDEELPF N