Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2954 |
Symbol | |
ID | 5744015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3621795 |
End bp | 3622733 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641294054 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_001560050 |
Protein GI | 160881082 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAG TTTATTTATG GGATATGCTT CTGCCAATTA CGCCTTCAAA AATTGTCACA AAAATAAACA ATCAGAATAA AACGTTAACG TTACTTAATG GCCAGGAGAT CAATTTAGTA AAATCTCCTG GTCTTACTGA TATTAATTTT CAAATGATAC TACCAGGAAA TAAATATCCT TTTGTCATTG GTAGTTACAA ATCGCCAAAC TGGTATCTTA ACAGATTACA GGAACTGAAA GTTAATAAAT TTTATACTAC ACTGTTAGTA TCAAGAGAAA TCAAGGGCAG AGAGTGGTTC AAGCAAGAGA TGGATGTTAC CCTCGAAGAC TACTCCATAA CGGAAGATTC TAAAAACGGG TTCGATTTAG TTGTTGATGT CAAACTCAAG CAATACATCG ATTATGGAGT TAAATACGTC ATACTTGAAA ATGTAAAGGA TGGTGTAGTT GAGAAGAAAA CTAGATCCTC TTCCAAGACA ATCCCAAAAA CTTATACCGT TGCGAATGGT GATACTCTTT GGGCCATTGC TAAGAAGTTA CTAGGAGACG GTTCAAAGTG TTGGAACCTA GCAAAATTAA ACAATATCAA AAACCCTAAT ATTATCTTTG TTGGACAGGT TTTAAAGATT CAGGATGTTC CGGCAACAAC GCAAAAAAGC ACATCCACAT CTCAGAAAAC AGGTAGTTCG AGTACGTCGT CTATCACTAC TACTGCATTG GGTGGAAAGA GTGATACTAT GAAAAAAGCA ACAACTTCCG CCCCACTTAG TAATACTGGT ATACTTCAGG CAAAATTATC TGGTAACGAA GGACAAGGCA GTTATGATCT CAGAAAAGAT TGGTTAGGAG GCTTAAATGT ACCAGGTCAG CTTAATAATA AAAAACAAAC TGTATTTCCC CGTAGTGAGT GGTGGGCTAG TATGGACCAC GGAACGTAA
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Protein sequence | MYKVYLWDML LPITPSKIVT KINNQNKTLT LLNGQEINLV KSPGLTDINF QMILPGNKYP FVIGSYKSPN WYLNRLQELK VNKFYTTLLV SREIKGREWF KQEMDVTLED YSITEDSKNG FDLVVDVKLK QYIDYGVKYV ILENVKDGVV EKKTRSSSKT IPKTYTVANG DTLWAIAKKL LGDGSKCWNL AKLNNIKNPN IIFVGQVLKI QDVPATTQKS TSTSQKTGSS STSSITTTAL GGKSDTMKKA TTSAPLSNTG ILQAKLSGNE GQGSYDLRKD WLGGLNVPGQ LNNKKQTVFP RSEWWASMDH GT
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