| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2950 |
|---|
| Symbol | |
|---|
| ID | 5744011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3619140 |
|---|
| End bp | 3620219 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641294050 |
|---|
| Product | baseplate J family protein |
|---|
| Protein accession | YP_001560046 |
|---|
| Protein GI | 160881078 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGAGG ATATGACATA TGAAGTAATT TTAAATCGAG CCCTTGCCAG AATTCCACCC
GGAATTGATA AACGAGAAGG TAGTATGATT TATACTGCAG TTGCTCCGGT ATGTGCAGAG
TTAGCGCAGA TGTATGTAGA GCTCGAAGGA ATTATGAATG AATCCTTCGC TGATACTGCT
TCGAGAGACT TCCTTATTCG CAGAGCTGCA GAGAGAGGTC TGACACCAAA AGAAGCAACT
TATGCAGTTG TCAAAGGCGT AATTAATATT GATATACCAA TCGGCGCTAG ATTTACTCTG
GATAAATTTA GTTATAGGGC AACAGAGAAG ATATCTGCAG GAGCATTCAA GCTCACCTGT
GAGACTCCTG GAAGTTCGCC TAACAGCTCA ACAGGGGTAT TGTTACCAGT GGAATACATC
GATGGGTTGA CAAGTGCAAG TATCACCGAA ATACTCATTC CTGGCGAAGA GGAAGAAGAT
ACAGAAGTAT TCAGAAAACG ATACTTTGAC AGCTTAGATG CTCAGGCATT TGGTGGTAAT
CGTGCGGATT ATAAAGCAAA GGTATTGAGT CTTGATGGTG TAGGGGCTGT AAAAATATAT
CGTGCAACTA ATGTTTCAGG AGAAGAAAGC GGAGGAAATG TTAAGCTAGT GATACTTAAC
TCCGATCATG CAAAGCCTAG CGCAACTTTA GTAGATAGTG TTCAGTCTAC CATAGATCCG
ATTACAAATG GCGGTGATGG TTTAGGACTA GCTCCTCTAT GGCATTTTGT TCATGTCACC
GGTGCGGACG AAACAGTTAT TAATATTACA ACCACAATTA CTTACCAAAG CGGATATACC
TATGAGGACG TAAAAAGCTA TATTGCTTCG GCAATCGATG GCTATTTCAA AGACTTAGCC
AAGAGCTGGC AGGATGAGGG CAGCTCCGGA TTGGTAGTGA GAATTAGCCG TATCGATGTT
GCCCTACTAG GCATTCCAGG AATAGTTGAT GTCACTGGTA CGATGTTGAA TGGTAGTGCT
GTTAACATTG AGCTTGATAA AAACGCAATA CCGGTTAGGG GGTCTTTAAA TGGCAGCTAA
|
|---|
| Protein sequence | MYEDMTYEVI LNRALARIPP GIDKREGSMI YTAVAPVCAE LAQMYVELEG IMNESFADTA
SRDFLIRRAA ERGLTPKEAT YAVVKGVINI DIPIGARFTL DKFSYRATEK ISAGAFKLTC
ETPGSSPNSS TGVLLPVEYI DGLTSASITE ILIPGEEEED TEVFRKRYFD SLDAQAFGGN
RADYKAKVLS LDGVGAVKIY RATNVSGEES GGNVKLVILN SDHAKPSATL VDSVQSTIDP
ITNGGDGLGL APLWHFVHVT GADETVINIT TTITYQSGYT YEDVKSYIAS AIDGYFKDLA
KSWQDEGSSG LVVRISRIDV ALLGIPGIVD VTGTMLNGSA VNIELDKNAI PVRGSLNGS
|
|---|
| |