Gene Cphy_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2940 
Symbol 
ID5744001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp3612016 
End bp3612456 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content38% 
IMG OID641294040 
Producthypothetical protein 
Protein accessionYP_001560036 
Protein GI160881068 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00270236 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATCAT TATGTTGGCT TATCGTTTTA GCCTTATTGC TTGCCATAGA AATTGCGACC 
CTTGGACTGA CTACCGTTTG GTTTGCTGGT GGTGCTCTTA TAGGTTTCAT TGCATCATTG 
CTCGGAGTGG ACTTCTGGAT TCAGATGATT CTATTTATAC TGGTATCTCT ACTGCTTTTA 
TTTTTTACAA GACCAGTTGC AGTCAAACAT CTGAATAAAA GCCGAGTGAA AACGAATTAT 
GAGGGACTCA TTGGAAAAGT TGTTAAAATA ACACAACAGG TTGACAATGA CAATCAAACA 
GGGGAAGCAT TAGTCAATGG CCAAGAATGG ACCGTACGTT CTGAAACAGA TGGTGTTATC 
TATGAACCAG GAACGAAGGT TAGAATTGTT AATATTGTTG GTGTGAAACT AATTGTAACA 
GAATATAGGG AGGAGAATTA A
 
Protein sequence
MVSLCWLIVL ALLLAIEIAT LGLTTVWFAG GALIGFIASL LGVDFWIQMI LFILVSLLLL 
FFTRPVAVKH LNKSRVKTNY EGLIGKVVKI TQQVDNDNQT GEALVNGQEW TVRSETDGVI 
YEPGTKVRIV NIVGVKLIVT EYREEN