Gene Cphy_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2937 
Symbol 
ID5743998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3609559 
End bp3610320 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content34% 
IMG OID641294037 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_001560033 
Protein GI160881065 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0715772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA TTACAATATT TAAATCACTG GCCATTCTAT TGATCGTATT GATTGTTCTT 
TTAGCTATAT ATCTATTATG GAAGCAAAAG TTAATGATTT ATCTAAAACA GGAAGATGAA
CTGCGGTTGT ATAAATTATA TGTAAAGCCT TTGGAGGAAT TTATTAAAGA AATACGAGCA
AGGCAGCATG AGTTTGACAA CCACTTAAAT GCCCTCCTAA GTATGCATTT AACCATAGAT
AATTATGAGG AGCTTGTCAA ATCACAGGCA GAGTATATTA GGGAGCTTAT ATCCTTACCA
GAACATAATT ATCAAGGGTT GCTAAAAATC AGTAACAAAG TGTTAGCGGG GTTTTTGTAT
AGTAAAATTA TAGCTTCACC CCCGAATGTT CAAGTTGAAT TGATTGTGGG GAGCAAAGAT
ATCTTTACGA ATGTGCCGGA GATGGATGCA GTAGAAGTAC TTGGAACTTT GATTGATAAT
GCTTTTGAAG CTTGTGGTAA AGAAGAAGGA AACGTAAAAA TCTATCTAAC CTCCGAGGAT
GACCGCTTAA TTTTTATCAT TAAGAACCGC CATGAAAAGA TTCCAATCAA TGAACTATCT
AGATTTTTTG AGCGTGGTTA CTCTACAAAA AATACGAAGG AGAGTCAAGG ATATGGTTTA
TATAATGCAA ATCGCATTAT GAAGCATTGG GGCGGGGATA TCTATGTGGA GAATGAAATA
ATTCTTGGAG AAAATTATGT TAGCTTCCAT GTTGAGTTCT AA
 
Protein sequence
MNNITIFKSL AILLIVLIVL LAIYLLWKQK LMIYLKQEDE LRLYKLYVKP LEEFIKEIRA 
RQHEFDNHLN ALLSMHLTID NYEELVKSQA EYIRELISLP EHNYQGLLKI SNKVLAGFLY
SKIIASPPNV QVELIVGSKD IFTNVPEMDA VEVLGTLIDN AFEACGKEEG NVKIYLTSED
DRLIFIIKNR HEKIPINELS RFFERGYSTK NTKESQGYGL YNANRIMKHW GGDIYVENEI
ILGENYVSFH VEF