Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2936 |
Symbol | |
ID | 5743997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 3607450 |
End bp | 3609303 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641294036 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_001560032 |
Protein GI | 160881064 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0300224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGGAA TTGCTGGTTT CTATCATCCT AGACAAAACT ACTTAGAGAA AGAATCCTAC TATAAAACAA TTTTAAATTG CATGACCAAA CGTCTTTATC ATCGCGGTCC GGACGAACAG GGAATCTATC TGAATGAACA CATAGGCTTG GCTCATGCGC GTCTATCCAT CATTGACTTG GTTTCAGGCG GACAGCCAAT GCTACGCTCT TTTGGAGAAA GGACGTACGT CATCGTATAC AATGGCGAAA TATATAATGC AGAGGAATTA AAAAAAGAGT TGCAACAACA AGGCATGAGT TTTCAAACGA CTTGTGATAC TGAAGTCATA CTACTTGGTT TTATTGCTAA TGGACCTGAT TTCGTAAAAA AACTGAATGG TATCTTTGCT TATGCAATCA TTGATGTTGC AAAGAATTCC CTCTATCTCT TCCGCGATCA AGCTGGGGTA AAACCTTTAT TCTATACTTT ATATGAGGAT ACCTTAATCT TTTCCTCTGA GATAAAAGGA TTGTTTGAGT ACCCAGGATT TACACCGAAA GTTACGAGCG AAGGGTTAAA TGAAATATTC TCAATCGGTC CTGCCAAAAC CCCTGGATGC GGTGTTTTTG ATAAGGTCAA GGAAGTTTTA CCAGGGGAAA TGGTTTGCTA TAACCAAAGT GGTTTTACGA AAGAACTCTA TTGGAAACTG GTGAGCAAGC CACACGAGGA TTCTTATGAA GAAACCATGG AACGAACTGG GTTCCTAGTT ACGGATGCGA TACGCCGCCA GATGGTCAGT GATGTTCCAA TCTGTACCTT TCTCTCAGGT GGGATAGACT CTAGTATTGT AACTGCAGTT TGTGCAAATG AATTAAAGAA AAAGAATAAG CAACTTGACA CCTTTTCCTT TGACTTCGTG AACAATGAAG AATTTTTTAA AGCTAATAAA TTTCAGCCAT CAAGAGATCT GCCTTATGCA CTGAAAATGG CGGAGCATTT TAACACCAAT CATCATCTTC TAGAATGTGA TAATGTTATG TTAGCGAAGC GACTACATGA TTCCGTACTT GCAAGAGATT TGCCAGCTAT GGCGGATATC GATTCCTCTA TCCTACATTT TTGTTCTCTC GTCAAACAAT ATGATAAAGT AGCTCTGACA GGGGAATGCG CAGATGAAAT CTTTGGAGGC TATCCTTGGT TTCATAGTGA GGAGGCCAAA AAATCTCATT CCTTTCCTTG GTCAAGAGAC CTAAGTGCAA GAAAGCAGTT ATTAAAGGAT GAATTTCTTC AGTGTCTTCA TATGGACGAA TATGTTCAGA ATGCGTATGA AACAACAGTG AGTGAAACAC CTTATCTCGC AGAAGATTCC GAGGACGAAA GAAGACTTAG AGAAATCTCT TATCTGAATC TTAAGTGGTT TATGCAAACC TTATTAGATC GTATGGATCG AACCAGTATG TATAGTGGAT TGGAAGCTAG AGTACCTTTT GCAGACATAA GAATCATTGA GTATCTATGG AATGTTCCAT TTTCTATGAA AGCTCCGGAT GGCATCGTAA AAGGGTTATT AAGAATGAGT TGTAGCGGTT TGTTACCCGA TGATATTCTC TGGCGAAAGA AATCTCCTTA TCCAAAAACC TATGATCCAG GATATGAATC CTTAGTTGCT ACACAATTAT TAGAAGTAAT GAATGATAGT TCTTCACCAA TCGTTTCATT TATTGATAAG AAAAAACTGG ATTCCTTCCT TCATACTCCA TCTGATTATG GGAAACCATG GTATGGCCAA CTTATGGCTG GTCCGCAAAC ACTAGCATAC CTCTTAATGA TAAATGATTG GTTAGAAACT TATCATATTG AAACAGTAAT ATAA
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Protein sequence | MCGIAGFYHP RQNYLEKESY YKTILNCMTK RLYHRGPDEQ GIYLNEHIGL AHARLSIIDL VSGGQPMLRS FGERTYVIVY NGEIYNAEEL KKELQQQGMS FQTTCDTEVI LLGFIANGPD FVKKLNGIFA YAIIDVAKNS LYLFRDQAGV KPLFYTLYED TLIFSSEIKG LFEYPGFTPK VTSEGLNEIF SIGPAKTPGC GVFDKVKEVL PGEMVCYNQS GFTKELYWKL VSKPHEDSYE ETMERTGFLV TDAIRRQMVS DVPICTFLSG GIDSSIVTAV CANELKKKNK QLDTFSFDFV NNEEFFKANK FQPSRDLPYA LKMAEHFNTN HHLLECDNVM LAKRLHDSVL ARDLPAMADI DSSILHFCSL VKQYDKVALT GECADEIFGG YPWFHSEEAK KSHSFPWSRD LSARKQLLKD EFLQCLHMDE YVQNAYETTV SETPYLAEDS EDERRLREIS YLNLKWFMQT LLDRMDRTSM YSGLEARVPF ADIRIIEYLW NVPFSMKAPD GIVKGLLRMS CSGLLPDDIL WRKKSPYPKT YDPGYESLVA TQLLEVMNDS SSPIVSFIDK KKLDSFLHTP SDYGKPWYGQ LMAGPQTLAY LLMINDWLET YHIETVI
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