| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2933 |
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| Symbol | |
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| ID | 5743994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3602434 |
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| End bp | 3604077 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641294033 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001560029 |
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| Protein GI | 160881061 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTCAAA TTGTATTATC AGCGATGAAT ACAACTTCTA CAGATACCGA ACTTATTTTA
ATGAATACAA CTGCAGATAC GACCGTTAAT CAGATAGACA TTGGGTCTGG GCGGAATTTA
TTATATATTT TACTTGTGAC AATTGTGGTG TTTTTGATTT TTTTTCTTTT ATTGTTTGTG
AATATAAGGA AGCGAACCAA GGCAGAGAAA GCTGCTATTA ATGTAAATCA GAAACTAAAA
GAGAGCAATA AAGAATTAGA AAAGGCATTA TCAGAGGTTA CTGCAACCAA AGATGCATTA
CATAGTAAAT ATGAAGAACT GAAAAAGAGT AAAGAAATCG TGAAACGTAT GGCGTATTCC
GATTATTTGA CATCGCTGCC AAATCGGCTT GCATTTGTTG AACTATTGGA TGGTATCATG
GCGACAATAC GTCAGAATGA AATCGTTGGA ATCTTAGATA TCGATATTGA TAATTTTAAA
GACATCAATG ATACGTTAGG CCACTCCTAT GGCGATGAGA TGTTAATTGA TGTGATGCAT
CGCTTAGAAG AACTCATCAA AGAAAATGAT TATTTATCAA GAATCGGTGG AGATGAGTTT
GCAATATTAA TTCAGAATCT AACAGATTTA TCAGAGTTAG AAGAAAGAAT TTTGGAAGTA
CAGCAAATTT TTGCAACACC ATTTCGAGTT GCAACGAGAG AATTTTTTAT TACGGTCAGT
ATCGGAGTTG CGATTGCGCC AAAGGATGGT AAGACAACAC AAAGCCTTGT AAAGAATATG
AATTCTGCTA TGTACGAAGC AAAAGAACGT GGAAAAAATA ATTTCTGTTA TTATGATGAT
TCAATTAATC TTAAGATGAT GCAGAAGTTA GAGATGCAAT CAGAACTTCG TAAGGCAATC
GAAGAGAATC AATTTGTTGT ATATTATCAG CCGCAGATTA ATCTGGTAAA TGACCGTGTG
GTTGGATTCG AAGCATTAGC CCGTTGGCAA CATCCAGAGA AGGGAATTAT TGCACCAATT
GATTTTATTC CACTTGCTGA AGATAATGGA ATGATAGTTG CAATTGGAAA GAAGATGCTT
TATGAGTCTT GTATGCAGCT GCGTTCGCTC CAAGAGAGTG GTTATCGTGA TATCGTGATT
GCTGTGAATT TGTCAGCGAG ACAATTTAAG GACAAAGATT TTCTCCCTAT GGTATATGAA
ATACTGGAGG AGACGAAAGC AGATGCAAGA GGTTTGGAAT TTGAAATTAC AGAGACCGTT
GCGTTAGATG ATCTGGAATT TTCAATTTCT ACGATATCAA AACTTAAGGA AATCGGTATT
ACTTTCGCAT TAGATGATTT CGGGACAGGA TACTCTTCTT TAAATTACCT AAAGCGATTA
CCAGTGAATA ATTTAAAAAT TGACAAAAGC TTTTTAGATA CGATATTAGA GAATAATTCT
GATCAAAAGA TTGTTCATAC GATGATTGAT CTAGCAAAAC ATTTAAATAT TGAAGTGATT
GCAGAAGGTG TGGAATTATC GGAACAAGAA AAATTCTTAA AAGAAATCAA CTGTGGAAAA
GCGCAAGGAT ATTACTACGG TAAGCCTGTA CCTAAAGAAA TAGCATTTGA GATACTGAAG
AAATTAAATA GCGAAAATTC GTAG
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| Protein sequence | MLQIVLSAMN TTSTDTELIL MNTTADTTVN QIDIGSGRNL LYILLVTIVV FLIFFLLLFV
NIRKRTKAEK AAINVNQKLK ESNKELEKAL SEVTATKDAL HSKYEELKKS KEIVKRMAYS
DYLTSLPNRL AFVELLDGIM ATIRQNEIVG ILDIDIDNFK DINDTLGHSY GDEMLIDVMH
RLEELIKEND YLSRIGGDEF AILIQNLTDL SELEERILEV QQIFATPFRV ATREFFITVS
IGVAIAPKDG KTTQSLVKNM NSAMYEAKER GKNNFCYYDD SINLKMMQKL EMQSELRKAI
EENQFVVYYQ PQINLVNDRV VGFEALARWQ HPEKGIIAPI DFIPLAEDNG MIVAIGKKML
YESCMQLRSL QESGYRDIVI AVNLSARQFK DKDFLPMVYE ILEETKADAR GLEFEITETV
ALDDLEFSIS TISKLKEIGI TFALDDFGTG YSSLNYLKRL PVNNLKIDKS FLDTILENNS
DQKIVHTMID LAKHLNIEVI AEGVELSEQE KFLKEINCGK AQGYYYGKPV PKEIAFEILK
KLNSENS
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