| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2885 |
|---|
| Symbol | |
|---|
| ID | 5745158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3537625 |
|---|
| End bp | 3538923 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641293985 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001559982 |
|---|
| Protein GI | 160881014 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00035649 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA ATTATAAGCG CACGTTTTTT GTAGGTCTTG CCTTTTTATC AATCTGTTCT
TTTTGGCAGT TGTACGACAA CATTATTCCA TTAATCCTAA AGAATACGTT TGGGATTGGA
GAAACAGTTA CCGGAGTAAT CATGGCATTG GATAATGTCC TTGCATTATT TCTATTGCCG
CTATTTGGCA TATTGTCGGA TCGAACAAAC ACTAGATGGG GTAGGCGGAC ACCATTTATT
GTCGTAGGAA CCATTGCATC AACGATATTT ATGATGATAA TTCCAATTGC TGACCAAAAT
AAGCAATTTG TTGTCTTTAT CATAGCACTT GGTCTAGTGC TCCTATCTAT GGGAACTTAT
CGTTCTCCTG CAGTTGCGCT TATGCCAGAT TTAACTCCTA AGCCACTTCG TAGTATGGCG
AATGCCATTA TTAATTTAAT GGGTGCTGTT GGTGGATTAA TCAGTTTAGT GTTGATTATG
ATATTCGTGA AGAAAGAGAA GTCACCAGAT TACGTACCTA CCACACCACC CAATTACATA
CCACTCTATA CTGTGGTAGC TCTGATTATG TTAATCGCGG TTATTGTTTT ACTTGTTACA
ATCCGTGAAA ATAAGATGAG AGATGAAGTT GCAGTCTATA ACGCAGATGA GCCGGAAGAA
AGGATAGAAG TTAAAAATGA ACCAATGAAA CCAGAAGTAA AACGTAGTTT AATCTTCTTG
GTAGCATCTA TCTTTTTATG GTTTACAGCG TATAATGCGG TAACGACAGC ATTCTCTAGA
TATACAGAAG TTGTATGGAA ACTTGGAGCA GGTGGCTTTA CTACCTGTCT TTTAGTTGCG
ACGGGAGCAG CGATTGTAAG TTATATACCG ATTGGTATTA TTGCAAGTAA AATTGGTCGT
AAGAAGACGA TATTAATTGG TATTAGCTTG ATTACATTCT CTTATGTGTG TGGATGTTTC
TTCGCTGAAT ATTCATCATT AATTAATGTT GTTTTTGCAA TCACTGGTAT AGGATGGGCT
GCAATTAATG TAAATTCCTA TCCGATGATT GTTGAGATGA GCAAGGGAAG TGATGTGGGA
AAATATACAG GTTATTACTA TACGTTCTCC ATGACAGCTC AGATCATGAC TCCAATTTTA
TCAGGTGCGT TATTAGAATT TGTGTCTTAC CGTACGTTAT TCCCTTATGC TGTTTTCTTT
TCTGTAGGAT CTTTTATTAC GATGTTATTT GTAAAACATG GTGATGCAAA GCCAGAAAAA
AAGCAGAAAA TGTTGGAAAA CTTTGATGTC GAAGATTAA
|
|---|
| Protein sequence | MKLNYKRTFF VGLAFLSICS FWQLYDNIIP LILKNTFGIG ETVTGVIMAL DNVLALFLLP
LFGILSDRTN TRWGRRTPFI VVGTIASTIF MMIIPIADQN KQFVVFIIAL GLVLLSMGTY
RSPAVALMPD LTPKPLRSMA NAIINLMGAV GGLISLVLIM IFVKKEKSPD YVPTTPPNYI
PLYTVVALIM LIAVIVLLVT IRENKMRDEV AVYNADEPEE RIEVKNEPMK PEVKRSLIFL
VASIFLWFTA YNAVTTAFSR YTEVVWKLGA GGFTTCLLVA TGAAIVSYIP IGIIASKIGR
KKTILIGISL ITFSYVCGCF FAEYSSLINV VFAITGIGWA AINVNSYPMI VEMSKGSDVG
KYTGYYYTFS MTAQIMTPIL SGALLEFVSY RTLFPYAVFF SVGSFITMLF VKHGDAKPEK
KQKMLENFDV ED
|
|---|
| |