Gene Cphy_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2858 
Symbol 
ID5745131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3506210 
End bp3506770 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content32% 
IMG OID641293959 
Productthymidine kinase 
Protein accessionYP_001559957 
Protein GI160880989 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0118174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAT TATATTTTAA ATACGGTTGC ATGAATAGCA GTAAATCAGC GAATCTTCTG 
ATGATACGCC ATAATTATGA GGAACAGGGC TTTAATATTT TATTATTAAA ACCTTCCATA
GATGACCGAG AAGGAAAATC AATTATTAAA TCAAGGATTG GAATTGAAGC AGAATGCATT
ATGGTTAAGC CATTAGATTC TATTAAGGAT ATTTTTCAAA AAAATCCTGC TGATATTATT
ATGGTTGATG AAGCTCAATT TCTAACGAAA GATCAAGTCG ATGAACTATA TGATATTTCT
TTTCAAAACA ATGTCTTATG TTTCGGTTTG TTGACGGATT TTCAACAACG TCTTTTTGAA
GGAAGCCAAA GATTGATTGA GCTTGCTGAG AGTTTACAGG AAATTAAAAC TGTTTGTGCC
TGTGGTCGTA GAGCAACGAT GAATGTTCGC TTTGATGAAC ATGGTAATGT AATTACTCGT
GGCGAACAAG TTGACATAGG AGGAAATGAT AAATATAGAG CGATGTGTAA ATATTGCTAT
AATAATCTAA CAAAAAAATA A
 
Protein sequence
MSKLYFKYGC MNSSKSANLL MIRHNYEEQG FNILLLKPSI DDREGKSIIK SRIGIEAECI 
MVKPLDSIKD IFQKNPADII MVDEAQFLTK DQVDELYDIS FQNNVLCFGL LTDFQQRLFE
GSQRLIELAE SLQEIKTVCA CGRRATMNVR FDEHGNVITR GEQVDIGGND KYRAMCKYCY
NNLTKK