Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2858 |
Symbol | |
ID | 5745131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 3506210 |
End bp | 3506770 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641293959 |
Product | thymidine kinase |
Protein accession | YP_001559957 |
Protein GI | 160880989 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1435] Thymidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0118174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAT TATATTTTAA ATACGGTTGC ATGAATAGCA GTAAATCAGC GAATCTTCTG ATGATACGCC ATAATTATGA GGAACAGGGC TTTAATATTT TATTATTAAA ACCTTCCATA GATGACCGAG AAGGAAAATC AATTATTAAA TCAAGGATTG GAATTGAAGC AGAATGCATT ATGGTTAAGC CATTAGATTC TATTAAGGAT ATTTTTCAAA AAAATCCTGC TGATATTATT ATGGTTGATG AAGCTCAATT TCTAACGAAA GATCAAGTCG ATGAACTATA TGATATTTCT TTTCAAAACA ATGTCTTATG TTTCGGTTTG TTGACGGATT TTCAACAACG TCTTTTTGAA GGAAGCCAAA GATTGATTGA GCTTGCTGAG AGTTTACAGG AAATTAAAAC TGTTTGTGCC TGTGGTCGTA GAGCAACGAT GAATGTTCGC TTTGATGAAC ATGGTAATGT AATTACTCGT GGCGAACAAG TTGACATAGG AGGAAATGAT AAATATAGAG CGATGTGTAA ATATTGCTAT AATAATCTAA CAAAAAAATA A
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Protein sequence | MSKLYFKYGC MNSSKSANLL MIRHNYEEQG FNILLLKPSI DDREGKSIIK SRIGIEAECI MVKPLDSIKD IFQKNPADII MVDEAQFLTK DQVDELYDIS FQNNVLCFGL LTDFQQRLFE GSQRLIELAE SLQEIKTVCA CGRRATMNVR FDEHGNVITR GEQVDIGGND KYRAMCKYCY NNLTKK
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