| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2847 |
|---|
| Symbol | |
|---|
| ID | 5742167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 3488737 |
|---|
| End bp | 3490245 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641293943 |
|---|
| Product | 2-keto-3-deoxygluconate permease |
|---|
| Protein accession | YP_001559946 |
|---|
| Protein GI | 160880978 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
|---|
| TIGRFAM ID | [TIGR01703] hydroxylamine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAATA ATATGGATTT AGAATATGAA ATGTTTTGTT ACCAGTGTGA GCAAACCGCT
GGTGGAAAAG GTTGTACCAA ACAAGGGGTA TGTGGTAAAA CAGCAGAAAT TGCAAATCTT
CAGGATCTAC TTGTATTTCA GATAAAAGGT ATCAGCTGCT ATGCAAAAGA AATGATTGAA
CGTGGTGAAT ACATCGATAA ATCGATTGTT ATCTTAATTG AAAACATATT ATTCACGACA
TTAACGAATG TTAATTTTGA CGCTTCTGTT CATGTTGAAT TATTAAAAGA AACCCAAAAA
GTAAAAGAAT CACTTCGAAA TCATGTTGGT GAAATTCATA ATAATACCGC TCAAGCCACT
TATAACTTAC CTGATACCAA AACTGATATG TTAAAAGATG CTCCATTAGC TGGTATTATG
TATGATAATG CTCTAGATCC GGATATTCGC TCCTTGAGAC AAACTATTGT TTATGGTGTG
AAAGGTATCA GTGCATATGG ACATCAAGCA AGATCGCTGG GATACTATAG TGATCAAGTG
GATAATTTTT ATATTCTTGC TCTCGAAGCC GTTACAGACG ATAAACTAAG TGTTGAAGAG
TTGATTCGAT GGACAATGAG AATCGGAGAA ATGGCAATCG AGGTAATGAA AAAACTTGAT
GAAGCAAATA CAAATACTTA TAAAAATCCA ACACCGCATA AAGTTAATGT CAATATAAGA
AAAGGTCCAT TTATCATTGT TTCTGGTCAT GATTTAAAAG ACCTTGAAAT GCTGTTAATT
CAAACAAAGG GCAAGGGAAT CAATATCTAT ACTCATGGAG AAATGATTCC TTCGCATGGC
TATCCAAATC TAAAAAAATA TCCTCATCTC GTCGGTAATT TTGGCGGTGC GTGGCAAGAT
CAACAGAAAC AATTTGATAA TCTTCCCGGA TGTATCTTAA TGACTACCAA TTGTCTTATG
AAACCAAGAG AATCCTATAA GGACAGAATT TATAGCACAA ATGTTGTAGG TTGGGATGGA
GTTAAGCATA TAAAAAAAGA TGAAGATGGA GAAAAGGACT TTAGTGAAAT AATACAACAA
GCACTGGAAT TAGGTGGATT CCTAGAAGAT GAAGAGCCAC ATGAAATTCT TGTTGGCTTT
GGACATCATG CTACACTTAG TTATGCCGAA AAAATAGTAG AAGCAGTAAA AAGCGGAGAA
CTTCGGCATT TCTTTCTTAT CGGCGGATGT GACGGAGCTA GACCGGGTGC TACAGCCTTA
GCAGATGCTT TTCAAACAGA TGTAAACGGT CTACCTCTTT CATTAATCGT CTCCTGGTAT
GAGCAAAAAG CCGTTGCAGA TTTATTAGCA TTGCTTTCAC TAGGAATCAA AAGTATTTAC
CTCGGACCAT CCTTGCCAGC ATTTCTTAGT CCTAATGTTT TGCAATATCT CGTTGATACC
TTTGATATTA GAGCTATTAG TACTGCAGAA GATGATATTA AAACATGTTT GAAACAAAGT
ATAGCTTAA
|
|---|
| Protein sequence | MGNNMDLEYE MFCYQCEQTA GGKGCTKQGV CGKTAEIANL QDLLVFQIKG ISCYAKEMIE
RGEYIDKSIV ILIENILFTT LTNVNFDASV HVELLKETQK VKESLRNHVG EIHNNTAQAT
YNLPDTKTDM LKDAPLAGIM YDNALDPDIR SLRQTIVYGV KGISAYGHQA RSLGYYSDQV
DNFYILALEA VTDDKLSVEE LIRWTMRIGE MAIEVMKKLD EANTNTYKNP TPHKVNVNIR
KGPFIIVSGH DLKDLEMLLI QTKGKGINIY THGEMIPSHG YPNLKKYPHL VGNFGGAWQD
QQKQFDNLPG CILMTTNCLM KPRESYKDRI YSTNVVGWDG VKHIKKDEDG EKDFSEIIQQ
ALELGGFLED EEPHEILVGF GHHATLSYAE KIVEAVKSGE LRHFFLIGGC DGARPGATAL
ADAFQTDVNG LPLSLIVSWY EQKAVADLLA LLSLGIKSIY LGPSLPAFLS PNVLQYLVDT
FDIRAISTAE DDIKTCLKQS IA
|
|---|
| |