| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2840 |
|---|
| Symbol | |
|---|
| ID | 5742156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3471604 |
|---|
| End bp | 3472380 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641293932 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_001559939 |
|---|
| Protein GI | 160880971 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACAA AGAGAATTAT ACCGTGTCTA GATGTTCATA ATGGTCGAGT TGTTAAAGGA
ACTAATTTTC TTAATCTTAG GGATGCTGGT GATCCTGTTT TAGTCGGTGC AGAATACGGC
CAAGCAGGAG CAGACGAATT GGTATTTTTA GATATTACAG CTTCTTCTGA TGCAAGAACA
ATTAAGTTAG ATATGGTACG TAAAGTTGCC GAAACAGTAT TTATTCCTTT CACAGTGGGT
GGAGGTATTC GCTCCATAGA AGATTTTAAG CTGATTTTAC GCGAGGGAGC TGATAAGATA
GCAGTGAATA CTGCAGCTAT TATGAATCCA ACCTTAATTA GTGAGGCAGC AGATAAATTT
GGCAGCCAAT GTGTGGTTGT AGCCATTGAT GCAAAGTGTA GACCAGATAA TAGTGGGTGG
AATATTTACA AAAATGGTGG TAGAATAGAT ATGGGTATCG ATGCTGTAGA ATGGGCCATG
AAAGCAAATG AACTTGGTGC TGGAGAAATC CTACTAACGA GCATGGATTG TGATGGAACA
AAGAATGGAT ACGACTTAGA ATTGACAAAA CAGATATCAG AAAATGTATC AATTCCGGTA
ATTGCATCTG GTGGAGCTGG AACAAAGGAA CATTTTTATG AAGCTTTAAC AAGAGGAAAA
GCGGATGCTG TTTTAGCTGC ATCTTTGTTT CATTATAAGG AACTAGAAAT TAATGATCTA
AAAGAATACC TAAGAATGAA AGAAGTGAGC GTAAGATTAG AAGACAGGAG CTGTTAG
|
|---|
| Protein sequence | MHTKRIIPCL DVHNGRVVKG TNFLNLRDAG DPVLVGAEYG QAGADELVFL DITASSDART
IKLDMVRKVA ETVFIPFTVG GGIRSIEDFK LILREGADKI AVNTAAIMNP TLISEAADKF
GSQCVVVAID AKCRPDNSGW NIYKNGGRID MGIDAVEWAM KANELGAGEI LLTSMDCDGT
KNGYDLELTK QISENVSIPV IASGGAGTKE HFYEALTRGK ADAVLAASLF HYKELEINDL
KEYLRMKEVS VRLEDRSC
|
|---|
| |