| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2810 |
|---|
| Symbol | |
|---|
| ID | 5742126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3429863 |
|---|
| End bp | 3430933 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641293902 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001559909 |
|---|
| Protein GI | 160880941 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACTA TCAGTTTGTG TATGATTGTC AGGAATGAAG AGGATAATAT TTCCAAATGC
CTGATTTCAG TTAGAGATAT TGTTGATGAA ATAATCATTG TCGATACAGG CTCTACTGAT
AAAACAAAAG AAATAGTAGG ACTATTTACA AATGAAATTT ATGATTTCGA ATGGATAAAT
GATTTTTCAG CAGCAAGGAA TTTTTCTTTT TCAAAAGCAA CAAAAGACTA TATTCTTTGG
TTGGACGCCG ATGATGTCCT CCTTGAAGCA GACCGGATAA AATTAAAGAG GGTTAAGGAA
ATTCTTGACC CAAGTATAGA TGTAGTAATG ATGAATTACA ACTATGCATT TGATGAAAAA
GGGAATGTAC TGTTATCGCA TTTCAGAGAA CGACTATTGA AGAGAGCAAA GAATTTCTTA
TGGAACGATC CCATACATGA GTTTATTTCA TTTGAGGGAA AAGTAGTAAA TTCTGATATA
ACCATTACTC ATAAAAAATC TCATATGAAC AACCGTAGAA ATTTAAATAT ACTTGAAGCA
ATGTTGGCTG AAGGTAAGGA GTTTTCGCCG CGCAATATGT TTTACTACGC AAGGGAAAAG
CTCAATGTGA ATGAATATGA GGGAGCTATT GAGTATTTTA ACAAGATGCT TGATTCAGAA
AAAGGATTAC CTGCAGACTG CATAAGCTCC TGTATTTATC TTGCTAAAGC ATACAAAGCT
AAAAATGACA GGAAAAATAT GCTTAAAGCA TTAATTAGAA GCTTTGAATA CGACACACCA
AGAGCAGAAA TCTGCTGTCA ATTAGGTTAT TACTATAAGG ATATCGAGGA TTATAAAAGA
GCTATTTTTT GGTTTGATCT TGCTATGAAG CTTGAAAAAC CCGAATCAAA ATGGGGGCCA
ATACTTCATG AATATTGGGG TTTCATACCA TGTATTGAGC TGTGTTTATG CTATTACAAG
CTGGGAAATA TTGATGAAGC TATTAAATTT AATGATAAAG CTGCAGAGTA TAAACCTGAG
CATCCTTCAG TTTTACAAAA CAAAAAAGCT TTTGGCAATA TTAAAAATTA A
|
|---|
| Protein sequence | MITISLCMIV RNEEDNISKC LISVRDIVDE IIIVDTGSTD KTKEIVGLFT NEIYDFEWIN
DFSAARNFSF SKATKDYILW LDADDVLLEA DRIKLKRVKE ILDPSIDVVM MNYNYAFDEK
GNVLLSHFRE RLLKRAKNFL WNDPIHEFIS FEGKVVNSDI TITHKKSHMN NRRNLNILEA
MLAEGKEFSP RNMFYYAREK LNVNEYEGAI EYFNKMLDSE KGLPADCISS CIYLAKAYKA
KNDRKNMLKA LIRSFEYDTP RAEICCQLGY YYKDIEDYKR AIFWFDLAMK LEKPESKWGP
ILHEYWGFIP CIELCLCYYK LGNIDEAIKF NDKAAEYKPE HPSVLQNKKA FGNIKN
|
|---|
| |