| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2803 |
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| Symbol | |
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| ID | 5742118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3412480 |
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| End bp | 3415464 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641293894 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001559902 |
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| Protein GI | 160880934 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.293267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATTA ATATGAATGA TATTATAAAT AATAAACAAG ATAGTAAAGA GGGCGATTAC
TTACTGGTTA TCGATGGTTC CAGTCTTCTT TCAACTCAGT TTTTTGGTAA TCTACCAAAG
GAAATAATGT TTGCAAAGAC CATGGAGGAA AAAGAAAAGT ATTTCCCTAA AATTATGCAA
ACAGCCACGG GAGTATATAC AAATGCTGTA TATGGTTTCC TAAGAGTATT ATTAAAGATT
ATAAAGGATC AAAAGCCTAC CTATTTGGCA GTGGCTTGGG ATATTAGCCG TAATACATTC
CGAAGAGAGA TTTATCCTGA TTATAAAGGA AATCGTGGAG AAACTTTAGA ACCGTTAAAG
GATCAATTCA AACTTTGCCA ACATGTCTTA AAAGAAATGG GAATTGTTCA GTTTATGGAT
GAACGTTATG AGGCGGACGA TTTTAGCGGA ACCTTATGCC AAAAGTTTGA AGAGGAAGTC
CCAATTCGTG TCATGACAAA GGATAATGAT TATCTTCAAT TAATTACAGA GCGGACAAAC
CTTTGGCTAA TTCACAGTAC TGCAAAGAAG ACAGATGAAT TATATGAAAA ATACGGTTTA
AGTAAGAAAG AATTGAATGT ACCAGATCGT ACCTTTTTAT TTACACCAGA ATTAGTTGAG
AAGGAATTTG GCATTGAGCC TTCCTCTGTT CCATCACTAA AGGGGATTGG GGGGGATAGC
TCCGATAACA TAAAGGGTGT ACCTGGAGTA GGAGAAGCAA CTGCGGTTGC CTTAATAAAA
GAATATAAGA CAGTTGAGAA TCTTTATGAG ATACTTAATA ATTTAGATGA AACAGGTAAG
AAAGAGATTA ATGAGTATTG GAAAACGCTT GGAATCAAGA GAACTCCAAT CAATGCTTTA
TTAAAGATTA GTGATACTGA GCTTGTTGGA GAAAAGGCTG CTATTCTTAG TAAAACTTTA
GCTACCATAA AAAAAGACAT TGATTTAAAA GATCTTGGTC TTGAACAGTT AAGAATTCAT
ATTAACACAG AAAATGCACA GAAGTGTTTT AATGAATTGG AATTTAAAAC AATAAAGATG
GACAATGCAG AGGTTGAAGA TTCGTCTATA AATAACCTTC GCTTTGAGGC AGATAAAATT
AAAATTACTT CTAACTTAGA AGAGGTAGAA ACATTATTTT CTAACTTAAT AAAATTGTGG
GAAAAGAATC AGAAGAAGTT AAAGAAAACG AAGAAATCTA GGAACGATAA AAGTGATAGT
AAGATTACAA TCAAAGAAAT CAAGAAGCCA GAATATGCTT CGGAGGATGC CGTTGGAATT
AAGCTAATAA TGGAGAATAA GTCTCTTGTA GGTATTTCCG TTTATTATGG ATCAGAGGCG
TCCTTTATCA TTCCTTGCGA AGGGTTTATT ACACCAGATT TTCTAACTTC TAAACTCAAT
GGACTTCTTG AAAAAAAGAT TACACTTGCA ATCTTTGATA TTAAAAAATA CTTACCATAT
TTAAATGCAA ATGAGGAAAG CCCTTGTTTT GATGTAACGA TTGCTGGTTA TTTATTAGAA
CCAGACGCTA GCACTTATGA ATATCAAACT ATTGCTGAGA AGTATTTAGA ACTTGATCTA
CCAAGTGAGA AAGAAGTATT TAGTGGTCAA ACCTATGCTT CTTTGTCTTT ATTAGACCAA
GATCAGTATA AAAAAGCAGC ATGTTATGAA AGCTATGTGG CTCATCATAT ATATCCTGTC
TTACTTAAGT TATTATCAGA ACGTGGTCTA CTTCCGTTAT TTGCAGGGAT TGAAATGCCT
CTCGTTTATA CATTATATGA TATGGAGCAA AGAGGAATTC GTGTTGATAC TAATGGACTA
AAGGATTATA GTGATCAGCT TGGTGTTAGT ATCGTAGAAC TTGAAAAACA AATCTTTGAA
CTGGTGGGCG TAGAATTTAA TATTAATTCA CCTAAGCAGT TAGGAGAAAT CTTATTTCAG
CGACTAGGTT TATCATATGG GAAAAAAACA AAGACTGGTT ATTCTACCTC CGCTGAGGTC
TTAGAAAAGT TAAGTAGTGA ACATCCAGTG ATAAAATTAA TCCTACAGTA CCGCCAATTA
ACGAAGTTAA AATCCACGTA TGCAGATGGC CTTGTATCCT ATGTGGAAGG GGATGGCAGA
ATCCATGGAA CCTTTAATCA AACCATAGCA GCGACTGGAA GACTTAGTAG TACAGAACCT
AACCTTCAGA ATATACCAAT TCGTATGGAG CTAGGTAGAA AAATTAGAAA AGTTTTTATC
CCGGAGGATG GATATCTATT TCTAGATGCA GACTATTCCC AGATAGAACT TCGTTTGCTT
GCTCATATGT CAAATGATGC ACGGCTGATT GAGGCATATC GACAAGCTCA GGATATTCAC
CGTTTAACAG CTTCCGAAGT ATTTCACACC CCATTTGACG AGGTGACAAG TGCACAGCGT
AGCAATGCGA AAGCTGTAAA CTTTGGAATC GTATATGGTA TCAGTTCTTT TAGTTTGGGA
CAAGACCTTG ATATTACTAG AAAAGAAGCA GAGGAATATA TTAATAAGTA CTTCATGACC
TACCCAGGAG TTAAGACATA TCTCGATGGA TTAATTGAGG AAGGAAAAGA AACAGGCGTT
GTAAAAACCT TATATGGAAG AATTCGGCCA GTTCCTAACC TTACGAATTC TAACTTTATG
AAGCGTTCTG CGGAAGAGCG AATCGCAATG AATTCGCCAA TTCAAGGTAC TGCCGCGGAT
ATTATGAAAT TGGCTATGAT ACATGTGAAC CAAGTATTAA AAGAACGAAA GTTAAAATCA
AGATTATTAC TTCAAATCCA CGATGAGTTG CTGGTGGAAA CACATGAATC TGAAGTAGAA
GAAGTAGCAA AGATTATGAA AGAAGAAATG CAACAAGCTG CAAGTCTTTC CGTTCCGCTC
GAAGTTGAGG TTGCTAATGG TAATAACTGG TACGAGGCTA AATAA
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| Protein sequence | MVINMNDIIN NKQDSKEGDY LLVIDGSSLL STQFFGNLPK EIMFAKTMEE KEKYFPKIMQ
TATGVYTNAV YGFLRVLLKI IKDQKPTYLA VAWDISRNTF RREIYPDYKG NRGETLEPLK
DQFKLCQHVL KEMGIVQFMD ERYEADDFSG TLCQKFEEEV PIRVMTKDND YLQLITERTN
LWLIHSTAKK TDELYEKYGL SKKELNVPDR TFLFTPELVE KEFGIEPSSV PSLKGIGGDS
SDNIKGVPGV GEATAVALIK EYKTVENLYE ILNNLDETGK KEINEYWKTL GIKRTPINAL
LKISDTELVG EKAAILSKTL ATIKKDIDLK DLGLEQLRIH INTENAQKCF NELEFKTIKM
DNAEVEDSSI NNLRFEADKI KITSNLEEVE TLFSNLIKLW EKNQKKLKKT KKSRNDKSDS
KITIKEIKKP EYASEDAVGI KLIMENKSLV GISVYYGSEA SFIIPCEGFI TPDFLTSKLN
GLLEKKITLA IFDIKKYLPY LNANEESPCF DVTIAGYLLE PDASTYEYQT IAEKYLELDL
PSEKEVFSGQ TYASLSLLDQ DQYKKAACYE SYVAHHIYPV LLKLLSERGL LPLFAGIEMP
LVYTLYDMEQ RGIRVDTNGL KDYSDQLGVS IVELEKQIFE LVGVEFNINS PKQLGEILFQ
RLGLSYGKKT KTGYSTSAEV LEKLSSEHPV IKLILQYRQL TKLKSTYADG LVSYVEGDGR
IHGTFNQTIA ATGRLSSTEP NLQNIPIRME LGRKIRKVFI PEDGYLFLDA DYSQIELRLL
AHMSNDARLI EAYRQAQDIH RLTASEVFHT PFDEVTSAQR SNAKAVNFGI VYGISSFSLG
QDLDITRKEA EEYINKYFMT YPGVKTYLDG LIEEGKETGV VKTLYGRIRP VPNLTNSNFM
KRSAEERIAM NSPIQGTAAD IMKLAMIHVN QVLKERKLKS RLLLQIHDEL LVETHESEVE
EVAKIMKEEM QQAASLSVPL EVEVANGNNW YEAK
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