| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2791 |
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| Symbol | |
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| ID | 5742106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3396694 |
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| End bp | 3397416 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641293882 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001559890 |
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| Protein GI | 160880922 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAT CAAATTCGAT GCTAAGACTG GATAAATACC TTGCGGATTT ATCGGTTGGA
ACTAGAACAG AAGTAAAGCA GATGATACGA AAGGGCAGAG TAATGGTAAA TGGGAATACC
GAAACTTCGC CAGAAACTAA GGTTGATAGT AATCATGATA AAATCTTCGT TGATAGCAGG
GAGTTATCCT ATGTTACTTT GGAGTATTTT ATGTTAAATA AGCCTGCTGG AGTGGTATCT
GCTTCGAATG ATAAAAAACA GACTACAGTC GTTGATTTAA TTGATGAGGC AAAGAGAAAA
GATCTTTTTC CAGTAGGACG CTTAGATAAG GATACAGAGG GACTTTTAAT TATTACCAAT
GATGGTGATT TAGCTCATCA GCTATTGAGT CCTAAAAAAC ATGTTGATAA AGTTTATTTT
GCAAAACTTC GGGACCCTCT TAAAAAAGAA GACGAAGAAG CATTTGCAGC TGGACTTAAA
ATAGACGAGG AGTTTACCGC TTTGCCGGCG AAGTTAGAGC GTATTTCAGA GCAAGAAGCA
TATGTAACGA TACGGGAAGG TAAATTTCAT CAAATAAAGC GAATGTTTGA AGCGACCAGG
AATGAGGTTA TCTATTTGAA ACGAATTTCG ATGGGAAGTC TTGTCCTTGA TGAGAGCCTT
TCTCTTGGCG AATATCGTGA GCTTACCGAA GAAGAAATTG AAGCGTTGCG TGAGAATAGA
TAA
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| Protein sequence | MSKSNSMLRL DKYLADLSVG TRTEVKQMIR KGRVMVNGNT ETSPETKVDS NHDKIFVDSR
ELSYVTLEYF MLNKPAGVVS ASNDKKQTTV VDLIDEAKRK DLFPVGRLDK DTEGLLIITN
DGDLAHQLLS PKKHVDKVYF AKLRDPLKKE DEEAFAAGLK IDEEFTALPA KLERISEQEA
YVTIREGKFH QIKRMFEATR NEVIYLKRIS MGSLVLDESL SLGEYRELTE EEIEALRENR
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