| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2785 |
|---|
| Symbol | |
|---|
| ID | 5742100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3390821 |
|---|
| End bp | 3392134 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641293876 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_001559884 |
|---|
| Protein GI | 160880916 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTA ATATGAGAAT TATCGAATTA AATGAATCAA CAAAAAATAA TATATTGGAA
AACCTACTAA AACGTAGTCC GAATCAATAT AGAGAATATG AAGATCAAGT TGCTGGCATT
ATTAGTGATG TAAAAAAACG TGGCGATGAG GCTTTATTTG AATATAGTTT ACGATTTGAT
AAAGCTACCA TCACAAAGGA AACGATACGT GTAACGGAAG AAGAAATTGC GAAGGCATAT
GAACAGATAC CACCATCAAC GCTTGATGTT ATCCGTAAGT CCATACATAA CATTGAAGCT
TATCACCAAA AACAAAAGCA ATATAGCTGG TTTGACAGTG AGCCCAATGG TGTTATTCTT
GGACAAAAGG TAACCGCAAT CGATGCAGTA GGTGTTTATG TACCAGGAGG AAAGGCTGCA
TATCCATCTT CCGTATTAAT GAATGTTTTA CCTGCGAAAG TTGCTGGTGT CAGACGAATA
GCTATGACAA CACCACCAGG TGCTGATGGC AATGTAAATC CAGGTACCTT AGTTGCAGCG
AAAGAGGCAG GGGTAACCGA AATCTATAAA GTGGGTGGGG CACAAGCAAT CGCTGCACTT
GCTTATGGAA CGGATTCAAT AAAAAAAGTA GATAAGATAG TTGGACCTGG TAACATCTAT
GTAGCGCTTG CAAAAAAAGC TGTATATGGA AATGTTAGCA TTGATTCTAT CGCTGGACCA
AGCGAAATTC TTGTAATTGC TGATGAAACT GCTAATCCAA GATTTGTTGC GGCAGACCTT
TTATCACAAG CTGAGCATGA TGAGTTGGCT TCTTCTATTC TAATTACAAC AAGTGAATCA
CTTGCTAAGA AAGTATCAGA TGAGATAGAT GGATTCTTAG AAGTTTTAAA TCGTAGTGAA
ATCATTCGTG CTTCTTTAGA TAACTATGGA TATATTTTGG TTGCGAAAAA CTTAAGTGAA
GCTATTGATA CAGCAAATGA GATAGCTTCT GAGCATCTTG AGATTATGAC CAAGAATGCG
TTTGAGGTAA TGACAAAGAT TAAGAATGCT GGTGCCATCT TTATTGGAGA ATATTCTTCT
GAGCCACTTG GAGATTATTT TGCAGGACCT AACCATGTAC TACCAACGAA TGGGACCGCA
AAATTCTTCT CACCACTGAG TGTAGATGAT TTTATTAAAA AGTCCAGTAT CATTTCTTAC
TCAAGAGAAG CCCTTTTTCC TGTTTACGAG GATATTGTCA CGTTTGCAAA GGCAGAAGGA
CTTACAGCTC ATGCTAATTC AATATCAGTG AGATTTGAAA ACGACGAAGT GTGA
|
|---|
| Protein sequence | MIINMRIIEL NESTKNNILE NLLKRSPNQY REYEDQVAGI ISDVKKRGDE ALFEYSLRFD
KATITKETIR VTEEEIAKAY EQIPPSTLDV IRKSIHNIEA YHQKQKQYSW FDSEPNGVIL
GQKVTAIDAV GVYVPGGKAA YPSSVLMNVL PAKVAGVRRI AMTTPPGADG NVNPGTLVAA
KEAGVTEIYK VGGAQAIAAL AYGTDSIKKV DKIVGPGNIY VALAKKAVYG NVSIDSIAGP
SEILVIADET ANPRFVAADL LSQAEHDELA SSILITTSES LAKKVSDEID GFLEVLNRSE
IIRASLDNYG YILVAKNLSE AIDTANEIAS EHLEIMTKNA FEVMTKIKNA GAIFIGEYSS
EPLGDYFAGP NHVLPTNGTA KFFSPLSVDD FIKKSSIISY SREALFPVYE DIVTFAKAEG
LTAHANSISV RFENDEV
|
|---|
| |