Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2766 |
Symbol | |
ID | 5742081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3368015 |
End bp | 3369376 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293857 |
Product | MATE efflux family protein |
Protein accession | YP_001559865 |
Protein GI | 160880897 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0984562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTAA TTCACGAAAT GAAGCAAGAT AAAGCCTTTC TGAAAAAGGC CGCAATGATA GCTATTCCTA TAGCTTTACA AGGGCTTTTA AACAATGTTT TAAATTTTGT TGATACCCTA ATGATTAGCC GTCTTGATAC TACAACAGTG GCCGCAGTAG GAATTGCAAA TAAGATTTTT TTTGTAGTGA GTCTTCTGTT ATTTGGAATT TGCAGTGGCT CTTGTATTCT GACCTCTCAA TATTGGGGGA TGAGGGATAT TAAAAACATT AAGCGTGTTG TCGGGCTATC CATGCTGCTT GGTGTTACGA GTGCTTTTTT ATTTACTTTA GTCTCATTTC TAAAGCCTCA ATTAGTAATG AGTATCTTTA CAAACAGTGA ACCAACAATA ATAATTGGTG CGAAATATTT AAAGATTGTA TGTATTAGTT ATGTAATAAC AGCAGTCACC CAAATTTTCA TGTCTGCACT TCGAAGTGTG AATCAGGTAA AACTACCAGT TGTAATTAGC CTTGTTGCGA TAGTGACGAA TGTTATTTTA AATTATGTCT TGATTTTTGG TAAGTTTGGA TTTCCAGAGC TAGGAGTAGA AGGTGCAGCT ATAGCCACAT TAATTGCAAG AATTGTAGAG GTTGTAGCAA TGATTTTACT CGTATATTAT AAGAAAAGTC CAGTTTCAAT TAGCGTGTCA CATCTTTTCT TTTACGATAA AGATTTATAC TCCATCTACT TTAAAACTGC ATCTCCGGTT ATTATGAATG AGTTTATGTG GGGACTTGGA ATTACGATGT ATTCCCTTGC CTATGGTAGA ATGGGTGATA ATGCGATGGC TGCTATCACA ATAACTCAAA ATATTGAACA GATATTACAG GTTGTTTTTA TGGGAATCAG TAATGCAACG GCAGTTATTC TTGGTAATGA ACTTGGTGCA GGAAAATTAA AGGATGCAGA GCTTCATGCA AAATTTATAT TAATTCTGCA AGCAATGGTA ACGGTAGTAA TTATTGCACT TGGGATAGTT TTTATGAATC CAATGATTGC AGTTTTTCAT ATGGAACCAG TTGTTTCTGC ATCTATTCGA AAGTGCTTAT TGGTGTTCCT TGCTTATTTA TTTTTTAAAG TATTTAATAC GGTTAATATC GTTGGTATCC TCCGAAGTGG CGGAGATACC AAAGCCGCGT TATTTCTTGA TGTCACTGGT GTTTGGTTGA TAGGAATACC GATGGCTTTT CTTGGTGGTT TAGTGTTTCA TTTTCCAATA GAAGCAGTAT ATGCAATGGT TTTATCAGAA GAAATTTATA AGATGATACT TGGAATTCCT AGATATCGTA AGAAAAAATG GTTGAGGAAT ATCGTAGCTT AG
|
Protein sequence | MNLIHEMKQD KAFLKKAAMI AIPIALQGLL NNVLNFVDTL MISRLDTTTV AAVGIANKIF FVVSLLLFGI CSGSCILTSQ YWGMRDIKNI KRVVGLSMLL GVTSAFLFTL VSFLKPQLVM SIFTNSEPTI IIGAKYLKIV CISYVITAVT QIFMSALRSV NQVKLPVVIS LVAIVTNVIL NYVLIFGKFG FPELGVEGAA IATLIARIVE VVAMILLVYY KKSPVSISVS HLFFYDKDLY SIYFKTASPV IMNEFMWGLG ITMYSLAYGR MGDNAMAAIT ITQNIEQILQ VVFMGISNAT AVILGNELGA GKLKDAELHA KFILILQAMV TVVIIALGIV FMNPMIAVFH MEPVVSASIR KCLLVFLAYL FFKVFNTVNI VGILRSGGDT KAALFLDVTG VWLIGIPMAF LGGLVFHFPI EAVYAMVLSE EIYKMILGIP RYRKKKWLRN IVA
|
| |