Gene Cphy_2736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2736 
Symbol 
ID5742051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3328548 
End bp3330104 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content35% 
IMG OID641293828 
Productglycoside hydrolase family protein 
Protein accessionYP_001559836 
Protein GI160880868 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5434] Endopolygalacturonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.835022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTC ATGTGATACT AAAAACTGCT AGAACAGCAG TGATTGAATT AATAGATCAA 
GGATTATATT ATACCAATGA AGAGTATGAA ATCTATGTAG ACAATACATT ATATGCAAAA
AGCAATAAAG TGGTACAATC TATTCATAAT TTAAAACCAG ATACGGAGTA CAGTATTTAT
GTAAAAAATG ATTCTGAAAC TTCTGAATTA GTAGTTATAA AGACTGATTA TGAATTTGTA
ACACTCAATG TAAAAGAGTT TGGCGCCAAA GGAGATGGTG TTCATGACGA CACCACAATG
ATACAGTGTG CTATTAATTC TTGTCCTAAG AACGGAAGGG TGTTAATTCC TGAAGGTTGT
TATAAGATCT CGACGTTATT TTTAAAGAGT GACTTACGCC TTGAATTAGG CAGGGGCGCA
GTGTTATCTG CCTTCACAGA TCGCTCCAAA TTCCCAATCC TTCCAGGTAG AATCGAAAGC
TTCGATGAGA CAGAGGAGTA TAATTTAGGA AGTTGGGAAG GCAATCCGCT AGATTCTTTC
GCTGGTATCA TAACTGGTAT CAATGTATCT AATGTTGAGA TTACTGGTGA GGGAACAATC
GATGGATGCG CTGATGAAAC TAATTGGTGG AATAATCCGA AAGTTAGAAA TATCGCTTGG
AGACCAAGAC TTATTTTCTT AAATCATTGC AACAATATTA CAGTACAGGG TATTACAGTT
AAGAATAGTC CTTGTTGGAA TATCCATCCT TATTTTTCAG ATGATCTTAA GTTTGTTGAT
CTTACCATAC TGAATCCAAA AGATTCTCCA AACACCGATG GTCTTGATCC AGAGTCCTGC
AAGAATGTCT TAATTGTTGG AGTGTATTTT TCCTTAGGAG ATGACTGTAT TGCGATTAAA
TCGGGAAAGA TATATATGGG TGCGAAGCAT AAGCGTCCAT CTGAAAATCT AGAAATTCGT
CAGTGTTGTA TGCGAGATGG ACATGGTTCT ATTACAATAG GAAGCGAGAT GGCAGGAGGA
GTTAAGAATC TAACTGTTCG CGAATGTCTC TTTATCCATA CAGACAGAGG TCTTCGTATA
AAGACGAGAC GTGGCCGCGG TAAGGATGCA ATTATTGATG GTGTATTATT TGAAAATATT
CGCATGGATC ATGTAATGAC TCCTGTAGTA ATTAATTGTT TTTATTTCTG TGATCCGGAT
GGTCATTCTG AATATGTTCA AAGTAAAAAT CCTTATGAGG TAGATGATAG AACACCTCAT
ATTGGTGAGT TAACTTTCCG TAATTTGGAT TGTACTAATT GTCATGCAGC AGCTTCTTAT
ATGTATGGAT TACCAGAACA AAAAATAGAG AAGATAACCT TTGAGAATGT TAATATATCA
TTTGCTGAAA ATCCTATAAA ATCAGTACCG GCAATGATGG ATGGTGCAGA TGAAACAAGT
TTGCTTGGGT TATTTGCTAA TAATTTAAAA ACATTAGAAT TAAAGAATGT GAAGATAGAA
GGTTATGAAG GTGAGAAATT CTTATTAAGT AATATTGATA ACCTGATAGA AGAGTAG
 
Protein sequence
MKFHVILKTA RTAVIELIDQ GLYYTNEEYE IYVDNTLYAK SNKVVQSIHN LKPDTEYSIY 
VKNDSETSEL VVIKTDYEFV TLNVKEFGAK GDGVHDDTTM IQCAINSCPK NGRVLIPEGC
YKISTLFLKS DLRLELGRGA VLSAFTDRSK FPILPGRIES FDETEEYNLG SWEGNPLDSF
AGIITGINVS NVEITGEGTI DGCADETNWW NNPKVRNIAW RPRLIFLNHC NNITVQGITV
KNSPCWNIHP YFSDDLKFVD LTILNPKDSP NTDGLDPESC KNVLIVGVYF SLGDDCIAIK
SGKIYMGAKH KRPSENLEIR QCCMRDGHGS ITIGSEMAGG VKNLTVRECL FIHTDRGLRI
KTRRGRGKDA IIDGVLFENI RMDHVMTPVV INCFYFCDPD GHSEYVQSKN PYEVDDRTPH
IGELTFRNLD CTNCHAAASY MYGLPEQKIE KITFENVNIS FAENPIKSVP AMMDGADETS
LLGLFANNLK TLELKNVKIE GYEGEKFLLS NIDNLIEE