| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2735 |
|---|
| Symbol | |
|---|
| ID | 5742050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 3327576 |
|---|
| End bp | 3328295 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641293827 |
|---|
| Product | GDSL family lipase |
|---|
| Protein accession | YP_001559835 |
|---|
| Protein GI | 160880867 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.886563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA CGATATTCTG GGCCGGTGAC TCCACCGTAA AACAAAATGA TTTTACTAGT
TTCCCTCAGA CTGGAATTGG CCAAGGACTA TCCCTTTACC TTAAAAAAGG AGTACAAATT
AAAAACTATG CTCAAAATGG GCGCAGTACC AGAAGTTTCA TTGCGGAAGG CCGCTTACAA
GCTGTCGAAA AAAACATAAA AGAAGATGAT TTTTTATTGA TACAATTTGG ACATAACGAT
GAAAAGCCTG ACGAGGAACG TCATACTGAG CCATTCACTA CTTTTCAGGA AAACTTAAAA
CAATATATTA AAGTAGCAAT TGACCATAAA GCACATCCAG TCCTTATTAC TCCACTCTAT
CGACGTCTCT TTAAAGAAGA TGGTCAGTTG GTAGATGATA CGCATCTTGA TTATCCGGAC
GCTATGATTG CACTTGGAAA AGAACTGAAA GTTCCTGTGA TTGACCTATG TTCGATTAGT
AAAGATTTGA TACAAAAGAC TGGCGATGAG AAATCAAGAA AATGGTTTAT GCACTTAGAA
CCAACGGAGT ACCCAAATTA CCCTGAGGGA AAAATCGATA ATACCCATCT TAGATACGAT
GGTGCCGTAG CTTTTGCAGG AATTATCGCA AAAGAATTAC GAAAACTTGG CGGAAGATAT
GCTGATCTAT TACTTCCTAT TGATGGGGAA AAAGAGGACT CTTCGTTTTT AATCGATTAG
|
|---|
| Protein sequence | MKQTIFWAGD STVKQNDFTS FPQTGIGQGL SLYLKKGVQI KNYAQNGRST RSFIAEGRLQ
AVEKNIKEDD FLLIQFGHND EKPDEERHTE PFTTFQENLK QYIKVAIDHK AHPVLITPLY
RRLFKEDGQL VDDTHLDYPD AMIALGKELK VPVIDLCSIS KDLIQKTGDE KSRKWFMHLE
PTEYPNYPEG KIDNTHLRYD GAVAFAGIIA KELRKLGGRY ADLLLPIDGE KEDSSFLID
|
|---|
| |